Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte5g00156 ATGTTACAGAAAAGTTTGAAATCATTTTCACAAGTTTTAACTTTGCAGACAGATACAGCTTCTGTCCTTCATGAAGCCATGGGATACATTAAATTTCTTCACGACCAAGTTCGAGTCTTGTGTTCACCTTATATGCAACACCGTCCTTCGTCTCCGCAAGACCAATATCGACGTCAAACTGAGGACATGGCGAAAGTAGGTGTAGAAACTTACAAAGACTTGTTTAAGACAGGGTTGTGTTTGGTCCCTGTGGAATGTACCCTACATGTAGCAAGTAGCAATGGTGCTGATTTTTGGTCGCCAGGCATGTGGTTTTAA 318 0.4151 MLQKSLKSFSQVLTLQTDTASVLHEAMGYIKFLHDQVRVLCSPYMQHRPSSPQDQYRRQTEDMAKVGVETYKDLFKTGLCLVPVECTLHVASSNGADFWSPGMWF* 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte5g00156 105 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 16 90 - -
Pte5g00156 105 CDD bHLH_AtbHLH_like 16 40 IPR045239 -
Pte5g00156 105 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 4 50 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte5g00156 Pte-Chr5 1754242 1754813 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte5g00156 16 101 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31730 48.837 7.35e-22 82.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte5g00156 - - qsa:O6P43_011780 120.168