Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte5g00141 ATGAGCACGATCTCCGTCCATTCATCAATTCTGTTATCTGAGATTCTGATCATTTTTCTGTGTTTTCAGCATGAGGTGCCTGCTGCTGAAACAGTGGCAAAATCTAAAAGAGAAGTATTAAAAATCATCACTGTTGGTGGCTCTGATGAGCCTCCCCCTGATGAAGAACCTCCTACTTATGGACCTCCCCCTGAAGAACCTCCTATTTATGGACCTCCCCCTGAAGAAACTCCTAGTTATGGACCTCCCACGGAAGAACCTCCTTGCCCTCCACCGCTTGTCTTTGAGAACGAGAGACTTGAGAATGTCTACAATGTGCTTCAAAACTTCAAAGACCAAATTACTTGCGACCCGGAAGGGTATATTGACACGTGGGTTGGCATTGATGTCTGCAACTACAAGGGGTTAAGTTGTGCAACCTTCCCTGGCGCAAATAAGCGTGCAGTTTCAGGTTACAACTTCAATGAAGCTGGTTTTGCTGGATCAGACCTCAACCTCTTTGGATTGTTGGACCAGTTATCAGATACAGTCTACTTTCATGCCAACTCCAACAACTTCACTGGTGCTGTCCCTTTCGATATTGCAAACTTCATATACTTCTACGAAATTGACCTCAGTAATAACAAGCTGAGCGGTGAGTTTCCAAAGGCAGTTCTTGCTTCAAAGAATCTGACGTTCATAGACCTCAGGTTCAACTTTTTTCATGGCACAGTTCCTAGAGAACTGTTTGAGTTAGACGTGGATGTGATCTTCATCAATAACAACAAATTTGACCAATGTCTTCCTGACAACTTTGGATCCACATCAGCTGTGTACATAACTGTCGCAAGCAACAATTTCATTGGTCGAATCCCCAGAAGTGTTGGCAAGGCATCAAGACTGAAGGAGGTGCTGTTCTTGAATAACAGTCTCTCAGGCTGCTTACCTTATGAAATTGGTTTCCTCAGCAATGCTACTGTATTTGATGTAAGCATCAACAAGTTGACAGGGCCAATACCACAGTCTTTTGCCTGCTTGGGGAATATTCAGTATCTTAATTTGGGACAGAATTTCTTTTATGGACAAATCCCAGAACAGGTCTGCAAGCTGCCCAACCTGGTGAAACTGACCTTGTCAGGAAACTATTTCAACTGGATTGGACCTGAGTGTGTGAAGCTCATAAAAAAAGGAGTGCTTGATGTAAAAAAGAACTGCATTCCATCGTTTCCATGTCAGAGATCTCCATATGAATGTCATGTGTTTTATTCTAAGCCCAGGTACTGCTCCAACGCCAAATCACTGAGTTATATCCCTTGTGGGAAACACTACGAGAGTTGGGAGAAGACATTAGATCCTTCTTCACCAGTGACTTACAAAGCACTGACACCAGACAGTTCATGA 1380 0.4333 MSTISVHSSILLSEILIIFLCFQHEVPAAETVAKSKREVLKIITVGGSDEPPPDEEPPTYGPPPEEPPIYGPPPEETPSYGPPTEEPPCPPPLVFENERLENVYNVLQNFKDQITCDPEGYIDTWVGIDVCNYKGLSCATFPGANKRAVSGYNFNEAGFAGSDLNLFGLLDQLSDTVYFHANSNNFTGAVPFDIANFIYFYEIDLSNNKLSGEFPKAVLASKNLTFIDLRFNFFHGTVPRELFELDVDVIFINNNKFDQCLPDNFGSTSAVYITVASNNFIGRIPRSVGKASRLKEVLFLNNSLSGCLPYEIGFLSNATVFDVSINKLTGPIPQSFACLGNIQYLNLGQNFFYGQIPEQVCKLPNLVKLTLSGNYFNWIGPECVKLIKKGVLDVKKNCIPSFPCQRSPYECHVFYSKPRYCSNAKSLSYIPCGKHYESWEKTLDPSSPVTYKALTPDSS* 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte5g00141 459 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 89 438 - -
Pte5g00141 459 Gene3D Ribonuclease Inhibitor 270 430 IPR032675 -
Pte5g00141 459 MobiDBLite consensus disorder prediction 51 92 - -
Pte5g00141 459 Gene3D Ribonuclease Inhibitor 102 269 IPR032675 -
Pte5g00141 459 MobiDBLite consensus disorder prediction 44 92 - -
Pte5g00141 459 SUPERFAMILY L domain-like 108 399 - -
Pte5g00141 459 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 286 380 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte5g00141 Pte-Chr5 1628291 1629972 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte5g00141 80 418 Leucine-rich Repeat extension Gene Families AT3G24480 42.647 2.35e-89 279
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte5g00141 - - qsa:O6P43_011750 461.455