Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pte5g00132 | ATGCCAGGTGAGAGGAGAACCATTGGGTCTTTCCCCGAGGTTTTTAACATCAGCCAAGGGTCTTCTTCCAGGAGCTCTGATATGGCTCAGCAAACTTCCTCAAATGACATGTTCAATCCAGTAGATAGCCGGTTCCCCGATTACATGATAACTCCTCATGATCCTGCTTGTGAAAATACTGAGATTCCAAATCTTCAGAGCTTCAATGGTACGAATGCTGGTGAATCTAGTTCCAAATTGGATTTCCAAAGCCAAGTCTGTGATGATAGAATGAAAGTAGAAGATTGCTGGCCTGCTTCATTTAGTGCTCGTTCAGGAACTAGCCTCAGGCTGGAAGAAAGGCAACTTGCATCAAGTGATTTATCTTTTTCTGGTAGGTCAAATACACATGTATGTGGAAACCAACTGCGAAGGGACCATTTCCAAGGTTCCAGTTCAAGTCAGGTGCCACAAAATGTAAATTTTAGCGTGGGATATCTTGGTAGTGGTGCTAATTTTGTGCAGGGCATGAATGGCGAGTTTGATAGTTGCAAATCTCATGGGATGGAAATGGACCAGACAACTTCTACTGGTGCTTCATTTGATCATGTAGGATCTTCAGCTGGAACCTCTGGGTTTATGGTGGATGAAGATAGCGGTGAATCAAGTTCTTTGGGGAATTTAGGTTCTTCCTGCAAGAGAAAGGCCCTCGAAGGAAGTTCCAGTCATTCGTGTCTGGGTGGAAGCTCAAGCACTCTTATCAATGCAGAAGATGTTGCATGGGCTAACAATTTACCAAGTAGTTCAAGTATGTCTACACTCTCACAGAACATCCCAATTTTTGATTCTCCAGTATTTCAGAATCCAAGAGCTAGGATTGCAACGAGAGGAATGGCTTCTGATTCAATCCCTTTGCCAAGGATTGGGCGCAGCTCAACAAACCCTCTGAGAAATTTTGGGAGGAGAATAGACACTGGGCAGCATCTTGAGATTTTACCTCTTAATCTGTCATCAACTGGAACTGCTAGGAATTCCAACTTTTCCCCACCTCACCATCCATCAATAAGCGAGGCATCAAGTGATGCTTTGGAATTGAGATTAACAGCAGGAGGTGCAACTTCTGGCTCTGACCAAATCCAGTCAACTGCTACGAATGCGACCGGGCTATCCGCAAATTTTCAACATTTTGCTTGGGGTGGATCTTCTAATGCAATGGCTGACAGTGTACCGAATCCTCATATTCCCAGGGAGAGAGCAGTTCTCGAAGAATCAAATCCAAGGATTGGCACTAGAATCAATTCTGAGCATGCTTTTTATGTACCTGTGGCTGAGATGAGAAATTCAGGTAATGATTCAGCCTGGAATGTGGCTGCTGGTGGTATGAGTTCCTCTGGAGGTGTACCTTCTACAATTTGGGCTGGATCAAGTTCAAACTTTAATCCTTTCCCTGCCCCTACCTCTGTTCTTCCCAACAATGTTCCATCACATAACCAGAGATTGTCAGATGTTACACCTTGGTCTTTATTTCCATCTATTGGCTCTGATCCTGGAGTGCATAATGGTCACTTTAGCTCATTGACTGCTGGACCTTCTAGTTCTTCTCAGGACTCGGTTATTCCCAACAGATCCAATAGACAGGGCCACCACCAACCATATCCCAGATCATCATTCTCAATGGAGAGACGAGGTAATGGCATTCCTAATGCATCTCATTCATTGAGGGGATTAGTTGCTGACATTGAAGGGAGGCGCCGACTGATATCTGAGATTCGCCAAGTCTTGAATGCCATGCGCAGGGGAGAGAACTTACGAGCTGAGGATTACATGCTGTTTGACCCTTTAATATATCAAGGTATGGCTGAGATGCATGACAGACACAGAGATATGCGCCTTGATGTTGATAACATGTCTTATGAGGAGTTATTGGCATTAGAGGAGCGTATAGGAGATGTGAGCACTGGATTGAGTGAGGATGCCATTATGAAATTGATGAAACGGAGAAAATATGAATCTTCCATGACAAAGTCCTCACCGGATATTGAACCTTGCTGCATCTGCCAGGAGGATTATGCTGATGGTGAGGACCTTGGATCACTAGAGTGCGGGCATGACTTCCACTTGGACTGCATCAAGCAATGGTTAATGCAGAAGAACCTTTGTCCAATATGTAAAACGACAGCCTTAAACAGTGGCTAA | 2175 | 0.4441 | MPGERRTIGSFPEVFNISQGSSSRSSDMAQQTSSNDMFNPVDSRFPDYMITPHDPACENTEIPNLQSFNGTNAGESSSKLDFQSQVCDDRMKVEDCWPASFSARSGTSLRLEERQLASSDLSFSGRSNTHVCGNQLRRDHFQGSSSSQVPQNVNFSVGYLGSGANFVQGMNGEFDSCKSHGMEMDQTTSTGASFDHVGSSAGTSGFMVDEDSGESSSLGNLGSSCKRKALEGSSSHSCLGGSSSTLINAEDVAWANNLPSSSSMSTLSQNIPIFDSPVFQNPRARIATRGMASDSIPLPRIGRSSTNPLRNFGRRIDTGQHLEILPLNLSSTGTARNSNFSPPHHPSISEASSDALELRLTAGGATSGSDQIQSTATNATGLSANFQHFAWGGSSNAMADSVPNPHIPRERAVLEESNPRIGTRINSEHAFYVPVAEMRNSGNDSAWNVAAGGMSSSGGVPSTIWAGSSSNFNPFPAPTSVLPNNVPSHNQRLSDVTPWSLFPSIGSDPGVHNGHFSSLTAGPSSSSQDSVIPNRSNRQGHHQPYPRSSFSMERRGNGIPNASHSLRGLVADIEGRRRLISEIRQVLNAMRRGENLRAEDYMLFDPLIYQGMAEMHDRHRDMRLDVDNMSYEELLALEERIGDVSTGLSEDAIMKLMKRRKYESSMTKSSPDIEPCCICQEDYADGEDLGSLECGHDFHLDCIKQWLMQKNLCPICKTTALNSG* | 725 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pte5g00132 | 724 | MobiDBLite | consensus disorder prediction | 12 | 40 | - | - | |
Pte5g00132 | 724 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 638 | 721 | IPR013083 | - | |
Pte5g00132 | 724 | MobiDBLite | consensus disorder prediction | 513 | 546 | - | - | |
Pte5g00132 | 724 | SMART | ring_2 | 676 | 716 | IPR001841 | - | |
Pte5g00132 | 724 | MobiDBLite | consensus disorder prediction | 513 | 563 | - | - | |
Pte5g00132 | 724 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE RNF165 | 222 | 721 | IPR045191 | GO:0061630 | |
Pte5g00132 | 724 | SUPERFAMILY | RING/U-box | 675 | 720 | - | - | |
Pte5g00132 | 724 | ProSiteProfiles | Zinc finger RING-type profile. | 676 | 717 | IPR001841 | - | |
Pte5g00132 | 724 | Pfam | Ring finger domain | 676 | 717 | IPR001841 | - | |
Pte5g00132 | 724 | FunFam | E3 ubiquitin-protein ligase MBR2 | 643 | 721 | - | - | |
Pte5g00132 | 724 | MobiDBLite | consensus disorder prediction | 60 | 76 | - | - | |
Pte5g00132 | 724 | MobiDBLite | consensus disorder prediction | 1 | 76 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pte5g00132 | Pte-Chr5 | 1534943 | 1540071 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pte5g00132 | 1 | 723 | C3H Transcription Factor Family | AT2G15530 | 38.275 | 1.30e-122 | 380 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pte5g00132 | - | K19041 | qsa:O6P43_011730 | 663.299 |