Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte5g00130 ATGTGGATTGCCGAAATTGCGATTTACTTGAGACTTGTGCCCATTGCCCGAAATGTGCTAATATACGCTGGCTCCTGCCTCAAAGCCTCGTTTTTTTCTGAGTTCACTTTAGGTGACCTTTACCTCCCCAGCTGCAACATGATGGTTTGCAAAGCGGCTGACTCTTTGCTCTGTCTGTTGGGGTTTCTTGGAGTGCAGCTTCCACTGATAATGGCGGCCGTTTGCCCCTTGGACCTGAGTGGATCGAACTTCACACTGGCAGCCTCCTTATGCTCTAACAAAGATGGCAGGGGAAATTGTTGCCGCTATATTAATGCTAATATCGCCATTGGGATTGCTCGAAATGCAAATGCTACAGGCAACCTGGGTGTTGCTTCAAATTTATCAGACACCTGTCTACAAACTATATCTCAGACCTTGCAACTGTATGGGGTTCCTCGAAATGCAACAGCTTTCTGTGGCTTTGGGACTAAAATCCCAGTGAACTACAAGTGCATGGGTCGTACAACTGTCACACAAATGCTGCAATCACCGAAATTTGTGGACGTGATAGAGAATTGCAGAGTGCCACTTGGAGATGAAAGCAAATGCAAAAGATGTTTAAATGCTGGCATAGCTTACCTCCGTCTATTAGGCATTCAAGATAATGTGACATTGAGCACATGCCGTGATGCCTCTTTTGTTGCACTTGCAAGCCAAGTTGATAGTATATCAGCTACTGATATTGCAAGCTGTTTCTTTGGAGTCCAAGGGCTACTCGTGCCTCCTGCCTCTGCGGAGCCATCCCCATCTTTGCAGACACCCAAGGCTTCTCCAAGTCCACTTGTCGCAGATAGCCCACGCCAGTTATCACTAAGCATGCCTGTTAAGAGAAACCCCCATTCTTACCACCTGACATTAATTCCAGGTATTGGAATTGCAGTCACATCTACAGCCATTTTGGTGCTTGTTGTCCTGATAATTCTAATTCGTCGGAAAAGCAGAGAGCTGGATGATTTTGACAGCTTTGACAAGGCCTCGTCAAAATCTATTCCCATTTCTAATAGGGCATTGAAATATCAGGAAGGACAATTTATGTTTCGGAAATTCAAACACAAGGAGATAAAGAAGGCAACAGACAATTTCAACACTGTTATTGGACAAGGGGGGTTTGGAACAGTTTATAAAGCTCAATTTAGTGATGGCTTAATAGCAGCTGTGAAGAGGATGAACAAAGTGTCAGAGCAGGGGGAGGATGAGTTCTGCAGAGAGATAGAGCTTCTTGCTAGGTTGCATCATCGGCATCTCGTTGCTCTAAAAGGATTTTGCATCAAAAAGCAAGAGAGGTTTCTGATTTATGAATACATGGCCAGCGGAAGCTTGAAGGATCATCTCCATTCCCCTGGCAAAACATCTCTGAGTTGGCATACTAGAATCCAAATCGCCATTGATGTAGCTAATGCTCTGGAATATCTCCATTTCTATTGTGATCCTCCACTGTGCCACAGAGACATAAAGTCAAGTAATATTTTACTTGATGTCGATTTTGTTGCTAAGGTTGCTGACTTTGGCCTCGCACATGCTTCAAAAGACGGTTCTGTCTGTTTTGAACCTGTAAAGACAGACGTTCGGGGGACTCCAGGTTATATGGATCCTGAATATGTGGTTACTCAAGAGCTCACGGAGAAAAGTGACATTTACAGCTACGGTGTGCTTGTGTTGGAGATAATCACTGGCAAAAGAGCAATACAAGATAACAAAAACCTGGTCGAGTGGGCTCAAACATACATGGTATCAGACACAAGAATAATAGAGCTAGTGGATCCTAGTATTAGAGAGTCTTTTGACTTAGACCGGCTTCAGACAGTTGTTACCATTATAAGATGGTGCACCCAGAAAGAAGGCCGAGCAAGGCCTTCAATTAAGCAGGTACTTAGGCTTCTATATGAAACTTCAGATTCGAGACTTGGTGGGTTTGTAGAAGCCGTTGAAGATGAAGAGTATGAAGGCAATGAGGGGAGAGGTAGGGGTATTAAAGGAAGGAGACAAAGGAATGGATCATTGTTCCACAGTGGAGATGGCAGATGCCTTGCTTCTTCTTCAAGTACATCTAGATCACATTGCAGTAGGAACTTCTTACTTGAATCCGTTTCTCCAGAGTCACCTTCAAATATATTCTCAGTTTAA 2166 0.4391 MWIAEIAIYLRLVPIARNVLIYAGSCLKASFFSEFTLGDLYLPSCNMMVCKAADSLLCLLGFLGVQLPLIMAAVCPLDLSGSNFTLAASLCSNKDGRGNCCRYINANIAIGIARNANATGNLGVASNLSDTCLQTISQTLQLYGVPRNATAFCGFGTKIPVNYKCMGRTTVTQMLQSPKFVDVIENCRVPLGDESKCKRCLNAGIAYLRLLGIQDNVTLSTCRDASFVALASQVDSISATDIASCFFGVQGLLVPPASAEPSPSLQTPKASPSPLVADSPRQLSLSMPVKRNPHSYHLTLIPGIGIAVTSTAILVLVVLIILIRRKSRELDDFDSFDKASSKSIPISNRALKYQEGQFMFRKFKHKEIKKATDNFNTVIGQGGFGTVYKAQFSDGLIAAVKRMNKVSEQGEDEFCREIELLARLHHRHLVALKGFCIKKQERFLIYEYMASGSLKDHLHSPGKTSLSWHTRIQIAIDVANALEYLHFYCDPPLCHRDIKSSNILLDVDFVAKVADFGLAHASKDGSVCFEPVKTDVRGTPGYMDPEYVVTQELTEKSDIYSYGVLVLEIITGKRAIQDNKNLVEWAQTYMVSDTRIIELVDPSIRESFDLDRLQTVVTIIRWCTQKEGRARPSIKQVLRLLYETSDSRLGGFVEAVEDEEYEGNEGRGRGIKGRRQRNGSLFHSGDGRCLASSSSTSRSHCSRNFLLESVSPESPSNIFSV* 722
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte5g00130 721 Gene3D Phosphorylase Kinase; domain 1 338 448 - -
Pte5g00130 721 ProSitePatterns Serine/Threonine protein kinases active-site signature. 493 505 IPR008271 GO:0004672|GO:0006468
Pte5g00130 721 SMART serkin_6 373 641 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte5g00130 721 FunFam Putative receptor-like protein kinase 342 448 - -
Pte5g00130 721 Gene3D Transferase(Phosphotransferase) domain 1 449 656 - -
Pte5g00130 721 ProSiteProfiles Protein kinase domain profile. 373 649 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte5g00130 721 FunFam Putative receptor-like protein kinase 449 648 - -
Pte5g00130 721 Pfam Protein kinase domain 377 639 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte5g00130 721 MobiDBLite consensus disorder prediction 263 279 - -
Pte5g00130 721 ProSitePatterns Protein kinases ATP-binding region signature. 379 401 IPR017441 GO:0005524
Pte5g00130 721 PANTHER OS01G0750732 PROTEIN 214 666 - -
Pte5g00130 721 CDD STKc_IRAK 379 641 - -
Pte5g00130 721 MobiDBLite consensus disorder prediction 260 279 - -
Pte5g00130 721 Pfam SPARK 73 217 IPR043891 -
Pte5g00130 721 SUPERFAMILY Protein kinase-like (PK-like) 357 643 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte5g00130 Pte-Chr5 1506440 1511902 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte5g00130 67 722 Receptor kinase-like Gene Family AT3G19300 60.546 0.0 765
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_URK-1 Pte5g00130 Pkinase 6.7e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte5g00130 - - qsa:O6P43_011726 959.903