Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte5g00088 ATGGCTTCCTCAAGTGGAACATCATCAGGGTTGTCATTGGTTCAAAACTCTGGTTCTGAAGAAGATTTGCATGTTTTGATGGATGAGAGAAAAAGGAAGAGAATGATATCGAATCGTGAATCAGCGAGGAGGTCTCGGATGAGGAAACAGAATCATTTGGATGAGTTGATGACACAGGTGACTCAGCTCAGGAAAGAGAATCACCAGATTGTTACAAGTCTCACCATCACCACACAGCACTACTTGAGCGTTGAGGCCGAGAATTCCATAATGAGAGCTCAAGTGAACGAGCTGAGCCACAGACTGCAATCTTTGAATGAGATAATCAACTTCTTGAATGTCACTAATGTTGTCATGGATGCTACGGAATCAAACCCTTTCCTGCTTGAGCCTACTGCTGCTGATTATCACAGCTTCTTCAATCCATTGAGTATGGCCTACATGAACCAGCCAATTATGGCTGCAGCAGACATAGCACAGTATTGA 486 0.4362 MASSSGTSSGLSLVQNSGSEEDLHVLMDERKRKRMISNRESARRSRMRKQNHLDELMTQVTQLRKENHQIVTSLTITTQHYLSVEAENSIMRAQVNELSHRLQSLNEIINFLNVTNVVMDATESNPFLLEPTAADYHSFFNPLSMAYMNQPIMAAADIAQY* 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte5g00088 161 Gene3D - 28 82 - -
Pte5g00088 161 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 28 91 IPR004827 GO:0003700|GO:0006355
Pte5g00088 161 Pfam bZIP transcription factor 30 71 IPR004827 GO:0003700|GO:0006355
Pte5g00088 161 PANTHER BZIP TRANSCRIPTION FACTOR 44 5 157 - -
Pte5g00088 161 CDD bZIP_plant_GBF1 31 81 IPR045314 GO:0003700|GO:0006355
Pte5g00088 161 FunFam BZIP transcription factor 28 79 - -
Pte5g00088 161 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 33 48 IPR004827 GO:0003700|GO:0006355
Pte5g00088 161 SMART brlzneu 26 90 IPR004827 GO:0003700|GO:0006355
Pte5g00088 161 SUPERFAMILY Leucine zipper domain 30 82 IPR046347 GO:0003700|GO:0006355
Pte5g00088 161 Coils Coil 46 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte5g00088 Pte-Chr5 1095643 1096424 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte5g00088 26 162 bZIP Transcription Factor Family AT4G34590 58.156 8.98e-48 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pte5g00088 bZIP_1 7e-11 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte5g00088 K25786 - qsa:O6P43_001877 218.779