Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte5g00079 ATGGGAGAGGTCCGGCACGGAGGGTGTTGTCCGTCGATGGATCTGTTCCGGTCAGAGGCAATGCAGCTTGTTCAGCTTATCATTCCCATTGAATCAGCACACCTCACTGTCTCTTACCTTGGCGACCTTGGACTTGTTCAGTTCAAAGACCTCAATACAGAGAAGAGCCCTTTTCAGCGTACTTATGCCATTCAGATAAAAAGATGTGGAGAGATGGCACGCAAATTAAGATTTTTCAGAGACCAAATTTCAAAAGCAGGCTTGTCTTCAACAGGATCTACTGCACAAGCTGATATTAACATTGATGACCTAGAGGTGAAACTTGGGGAGCTTGAGGCGGAGCTGGTTGAAATGAATACCAATGACGAAAAATTACAACGCTCTTATAATGAACTTGTGGAATGCAAACTTGTCTTGCAAAAGGCTGGTGAGTTTTTCCACTCTGCTCACAGCACTGCAATGGAGCAGCAGAGGGAATACGAATCACGCACTCTTGGTGGAGAATCCATGGAAACTCCACTGTTACAGGACCAAGAGGTGTCAACTGATTTGTCAAAGCAAGTGAAGTTGGGATTTCTTTCTGGACTTGTTCCTAGGGAAAAATCTATATCATTTGAGCGGATTTTATTTCGTGCTACTAGAGGCAATGTCTTTTTAAGGCAAGCTACTGTTGAGAATCCTGTAACTGATCCTGTTTCAGGAGAGAAGATTGAGAAAAATGTGTTCGTGGTTTTCTACTCAGGAGAAAGAGCAAAAACAAAAATTCTTAAAATTTGTGAAGCCTTTGGTGCTAATAGGTACTCTTTCTCTGAGGAGCTTAGCAAACAAGCTCAAATGATAAGGGAGGTTTCCAGTAGGATTTCTGAGCTGAAGACCACTATTGATGCTGGACTGTCACATCGAAGTAATTTGCTGCAGAATGTTGGGGCTCGCATTGAACAATGGAGTCTTCTGGTAAGGAAGGAAAAATCAATTTATCACACCCTCAACATGCTTAGCCTTGATGTGACTAAAAAATGCCTTGTAGCTGAGGGCTGGAGTCCTGTTTTTGCTGCAAATCAGATCCAAGATGCGTTGCACCGATCAGCTGTTGATTCAAACTCCCAGATCGGTGCAATTTTTCAAGTTCTCCATACAAGGGACTTGCCGCCTACCTTTTTCCGAACAAACAAATTTACCTCTTCTTTTCAAGAAATTGTTGATGCATATGGGGTAGCCAAATATCAAGAGGCAAATCCTGCTGTTTACACCATAGTTACCTTCCCATTTCTTTTTGCTGTTATGTTTGGGGATTGGGGGCATGGAATTTGCTTGTTGCTGGCCACTTTATATTTTATCATCAGGGAGAAGAAATTTTCTAGTCAGAAACTCGGAGACATCATGGAAATGACATTTGGCGGTCGCTATGTTCTCTTGATGATGTCACTTTTCTCAATCTTCACTGGTTTCATCTACAATGAGTTCTTCTCGGTACCATTTCCACTTTTTGCTCCCTCAGCATATGAATGTCGTGACCTTTCTTGCAGTGAGGCTACTACAGTTGGCCTAATAAAAGTGCGTGGGGCTTACCCGTTTGGCGTGGATCCTGTCTGGCATGGCACTCGGAGTGAGTTGCCTTTCCTCAATTCATTGAAGATGAAAATGTCAATTCTTCTCGGGGTTGCCCAGATGAATCTTGGTATAGTTTTGAGCTTTTGCAATGCCATATTCTTCCGTAACAGACTGAATGTATGGTTCCAATTTATTCCTGAGATAATTTTTCTCAACAGTCTATTTGGCTACCTTTCCTTGCTTATTATTGTGAAATGGTGCACTGGTTCACAAGCTGATCTATACCATGTAATGATATACATGTTCCTAAGTCCCACTGATGAACTGGGTGAAAATCAGCTCTTTCCTGGTCAGAAATATATGCAGCAAGTACTATTGTTACTGGCACTTGTGTCTGTGCCTTGGATGCTGATTCCAAAACCCTTTCTTTTGAAGAAGCAACATGAAGAGAGGCATCGTGGTGAATCCTATGCGCCACTTCAGTCAGAAGAGACCTTGCAAGTAGAAACGAATGGTTCCCATGGTCATGCAGAATTTGAGTTCAGCGAAGTTTTTGTCCATCAACTCATACATACCATAGAATTCGTACTTGGGGCAGTATCTAATACAGCATCGTATCTTCGTCTTTGGGCCCTTAGGTATGTTGGCTAA 2202 0.4246 MGEVRHGGCCPSMDLFRSEAMQLVQLIIPIESAHLTVSYLGDLGLVQFKDLNTEKSPFQRTYAIQIKRCGEMARKLRFFRDQISKAGLSSTGSTAQADINIDDLEVKLGELEAELVEMNTNDEKLQRSYNELVECKLVLQKAGEFFHSAHSTAMEQQREYESRTLGGESMETPLLQDQEVSTDLSKQVKLGFLSGLVPREKSISFERILFRATRGNVFLRQATVENPVTDPVSGEKIEKNVFVVFYSGERAKTKILKICEAFGANRYSFSEELSKQAQMIREVSSRISELKTTIDAGLSHRSNLLQNVGARIEQWSLLVRKEKSIYHTLNMLSLDVTKKCLVAEGWSPVFAANQIQDALHRSAVDSNSQIGAIFQVLHTRDLPPTFFRTNKFTSSFQEIVDAYGVAKYQEANPAVYTIVTFPFLFAVMFGDWGHGICLLLATLYFIIREKKFSSQKLGDIMEMTFGGRYVLLMMSLFSIFTGFIYNEFFSVPFPLFAPSAYECRDLSCSEATTVGLIKVRGAYPFGVDPVWHGTRSELPFLNSLKMKMSILLGVAQMNLGIVLSFCNAIFFRNRLNVWFQFIPEIIFLNSLFGYLSLLIIVKWCTGSQADLYHVMIYMFLSPTDELGENQLFPGQKYMQQVLLLLALVSVPWMLIPKPFLLKKQHEERHRGESYAPLQSEETLQVETNGSHGHAEFEFSEVFVHQLIHTIEFVLGAVSNTASYLRLWALRYVG* 734
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte5g00079 733 PIRSF ATP6V0A1 11 731 IPR026028 GO:0000220|GO:0046961
Pte5g00079 733 PANTHER VACUOLAR PROTON ATPASES 15 729 IPR002490 GO:0033179|GO:0046961|GO:1902600
Pte5g00079 733 Coils Coil 94 128 - -
Pte5g00079 733 Pfam V-type ATPase 116kDa subunit family 39 729 IPR002490 GO:0033179|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte5g00079 Pte-Chr5 1036507 1045025 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte5g00079 13 729 Primary Pumps ATPases(2) AT4G39080 78.641 0.0 1177
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte5g00079 K02154 - gmx:100810062 1208.36