Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte5g00062 ATGGCCGCCGCTAACCTTTATTCATTGTCATCTTCTCTTCCAAAATTCTCTCCTTCACCTCTGATTCAAACAAATTCCCGTTCACTTATCTGTACAAAAGCTCTTCACGCTCTACACTCTCCCCAAAAAAGCAATCTTTCTTCAGAGGCCTCGACCAGTGCTCAAACTCACAAAGTATCAGCGAAGAACCCGATCTCTGAATTCTACTCTGAAAGTAAAACAAACCCAAATGACTATACTGCGGTTTCCTGTGATTATGATGAAAAGCCTCGTGAGGAGTGTGGTGTTGTGGGGATCTATGGGGATCCCGAAGCCTCTCGGCTTTGCTATTTGGCACTTCATGCGCTCCAGCATCGTGGTCAAGAAGGAGCTGGTATTGTCTCTGTTCACAACAATGTTTTGCAGCCAATAACAGGAGTTGGGCTCGTCTCTGATGTATTCAATGAGACTAAGCTTGATCAGTTGCCTGGAAAGTTGGCTATTGGGCATGTGAGGTATGCCACAGCTGGTGCGTCCATGCTTAAAAACGTACAGCCTTTTGTTGCAGGTTACCGCTTTGGATCAGTTGGGGTTGCTCACAATGGTAACTTGGTTAACTATGGTGCTCTAAGGACCAAGCTCGAGGAAAATGGATCGATTTTCAACACTACTTCTGATACTGAAGTTTTACTTCATCTTATTGCAACTTCAAAACACAGGCCTTTCATTCTGCGGCTCCTTGATGCTTGTGAACAGCTTGAGGGTGCTTACTCATTGGTGTTCGTGACGGAGGATAAGCTGGTTGCAGTGAGAGACCCTTTCGGGTTTCGACCATTAGTTATGGGGAGAAGGAGTAATGGCGCTGTTGTGTTTGCGTCTGAAACTTGTGCTCTTGATTTGATAGAAGCTACTTACGAGAGAGAGGTGTATCCTGGTGAGGTTTTGGTGGTGGACAAAAATGGAGAACAGTCACATTGCCTACTGGCACATCCACAGCCAAAGCAATGTATATTTGAGCATATTTACTTTTCTCGTCCAGATTCTGTTGTTTTTGGAAAGTCTGTCTATGAGTCTAGAAGGAAATTTGGGGAGATACTATCTACTGAAAGCCCTGTTGCTTGTGATGTTGTTATAGGAGTGCCTGACTCTGGAGTTGTTGCAGCTCTAGGATATGCTGCCAAAGCTGGGGTGCCATTGCAGCAGGGCTTGATTAGGTCTCACTATGTTGGAAGGACATTCATTGAGCCATCGCAGAAGATTAGGGACTTAGGAGTGAAACTGAAGCTCTCACCCGTGAGAGCTGTGTTGGAAGGTAAGAGGGTCGTGGTTGTGGATGACTCAATTGTAAGGGGAACAACATCTTCAAAGATAGTAAGGATGATCAAAGAGGCAGGAGCTAAGGAAGTTCACATGAGAATTGCAAGCCCGCCAATGATTGGATCATGTTATTATGGAGTAGATACACCTAGTTCTGAGGAGCTGATATCTAATAAGATGAGTGTGGAGGAGATTAACAAGTTCATTGGATCAGATTCACTTGCATTCCTTCCATTTGATAGCTTGAAACGATTGCTGGGTAATGATTCTCCTAATTATTGTTATGCTTGCTTCTCTGGAAAGTACCCCGTGGAACCCAGAGATGTAAAAGTGAAGAAGGTTGGTGATTTTTTGGATGATGGGTTGAATGGTCGTCCAGAATTTATTGATGGGGGTTGGGTTCAAGTGAACCGAAGTCACAAAGAGGTGGTGGGGACTGGGAGTGTGTAA 1746 0.4462 MAAANLYSLSSSLPKFSPSPLIQTNSRSLICTKALHALHSPQKSNLSSEASTSAQTHKVSAKNPISEFYSESKTNPNDYTAVSCDYDEKPREECGVVGIYGDPEASRLCYLALHALQHRGQEGAGIVSVHNNVLQPITGVGLVSDVFNETKLDQLPGKLAIGHVRYATAGASMLKNVQPFVAGYRFGSVGVAHNGNLVNYGALRTKLEENGSIFNTTSDTEVLLHLIATSKHRPFILRLLDACEQLEGAYSLVFVTEDKLVAVRDPFGFRPLVMGRRSNGAVVFASETCALDLIEATYEREVYPGEVLVVDKNGEQSHCLLAHPQPKQCIFEHIYFSRPDSVVFGKSVYESRRKFGEILSTESPVACDVVIGVPDSGVVAALGYAAKAGVPLQQGLIRSHYVGRTFIEPSQKIRDLGVKLKLSPVRAVLEGKRVVVVDDSIVRGTTSSKIVRMIKEAGAKEVHMRIASPPMIGSCYYGVDTPSSEELISNKMSVEEINKFIGSDSLAFLPFDSLKRLLGNDSPNYCYACFSGKYPVEPRDVKVKKVGDFLDDGLNGRPEFIDGGWVQVNRSHKEVVGTGSV* 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte5g00062 581 Gene3D - 353 517 IPR029057 -
Pte5g00062 581 CDD GPATase_N 94 344 IPR035584 -
Pte5g00062 581 Hamap Amidophosphoribosyltransferase [purF]. 93 534 IPR005854 GO:0004044|GO:0009113
Pte5g00062 581 SUPERFAMILY PRTase-like 329 541 IPR029057 -
Pte5g00062 581 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 94 535 IPR029055 -
Pte5g00062 581 Pfam Phosphoribosyl transferase domain 352 464 IPR000836 -
Pte5g00062 581 NCBIfam amidophosphoribosyltransferase 94 535 IPR005854 GO:0004044|GO:0009113
Pte5g00062 581 ProSiteProfiles Glutamine amidotransferase type 2 domain profile. 94 313 IPR017932 -
Pte5g00062 581 CDD PRTases_typeI 368 467 IPR000836 -
Pte5g00062 581 PANTHER AMIDOPHOSPHORIBOSYLTRANSFERASE 92 541 - -
Pte5g00062 581 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 94 317 IPR029055 -
Pte5g00062 581 Pfam Glutamine amidotransferase domain 175 291 IPR017932 -
Pte5g00062 581 MobiDBLite consensus disorder prediction 42 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte5g00062 Pte-Chr5 915297 917042 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte5g00062 87 567 PRT Gene Family AT2G16570 82.816 0.0 828
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte5g00062 K00764 - gmx:100801720 889.412