Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte5g00059 ATGGCTATCGATCACGTGTTGGGGGTAGAAGACCATGAGGAAAACTCATCTGCTGGCAACAAAATTCAACCCTTCTCATCTACACCAGAGTCACGACAATGGAAAAACCATGAGGACATGAACAAGTCTACAGCAACTTCGTTGGGAGATGTGTTGGGGCTAAAGGATTTCACCAGCTTGGAAGTTTGGAGAGCATCAGTAGCAGAGCTTGTTGGAACAGCAGTTCTGGTTTTTATATTGGACACATTGGTCATCTCTTCCTATGAGACTGAAACCAAAACACCAAATCTCATTATGTCATGCCTTATTGCAATAGTTGTTGCAATAATTCTTCTAGCTACTAACCCCATCTCTGGTGGCCATGTCAACCCTGTCATAACCATGGCTGCAGCTCTTGTTGGCATAATATCTCTTTCCAGGGCCGTCGTTTACATCTTTGCTCAATGCCTTGGTGGTGTGCTGGGTGCACTTGCTCTTAGAGCTGTGGTTAACGGCAAAATTGAAGAAACTTTCTCACTTGGAGCCTGCACCCTCACTGTCGTTGGACCTGGTCCACATGGGCCGATTGTGGTCGGTCTTAGCACAGGTCAGGCCTTATGGCTTGAGATAATTTGTACGTTTGTGTTCCTCTTTGCATCGATATGGATGGCCTTTGATGAACGCCAGGCAAAACAATTGGGCCGAGTTATGATATTCTCTATTATTGGAATAATACTGGGCCTTCTTGTGTTCGTCTCAACAACTGTGACAGCAACGAAAGGCTATGCTGGAGCAGGGATGAACCCAGCAAGGTGTTTGGGCCCAGCGTTAATTCGAGGAGGGCATTTATGGAATGGTCATTGGGTATTTTGGGCAGGACCAAGTATTGCATGCGTGGCATTTTACTTGTACGTTAAGATTGTCCCACTTGAGCATTTCCATGCCCAGGGATTCAACTACGATTTCTTTCATGTTCTGGGAGTCATCTTTGCATCAACTAGGGCTGGCAGGAAATGA 996 0.4588 MAIDHVLGVEDHEENSSAGNKIQPFSSTPESRQWKNHEDMNKSTATSLGDVLGLKDFTSLEVWRASVAELVGTAVLVFILDTLVISSYETETKTPNLIMSCLIAIVVAIILLATNPISGGHVNPVITMAAALVGIISLSRAVVYIFAQCLGGVLGALALRAVVNGKIEETFSLGACTLTVVGPGPHGPIVVGLSTGQALWLEIICTFVFLFASIWMAFDERQAKQLGRVMIFSIIGIILGLLVFVSTTVTATKGYAGAGMNPARCLGPALIRGGHLWNGHWVFWAGPSIACVAFYLYVKIVPLEHFHAQGFNYDFFHVLGVIFASTRAGRK* 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte5g00059 331 PRINTS Major intrinsic protein family signature 201 219 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pte5g00059 331 PRINTS Major intrinsic protein family signature 140 159 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pte5g00059 331 PRINTS Major intrinsic protein family signature 64 83 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pte5g00059 331 PRINTS Major intrinsic protein family signature 103 127 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pte5g00059 331 PRINTS Major intrinsic protein family signature 281 301 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pte5g00059 331 PRINTS Major intrinsic protein family signature 242 264 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pte5g00059 331 MobiDBLite consensus disorder prediction 10 40 - -
Pte5g00059 331 PANTHER AQUAPORIN-LIKE 10 320 - -
Pte5g00059 331 SUPERFAMILY Aquaporin-like 62 301 IPR023271 -
Pte5g00059 331 Gene3D Glycerol uptake facilitator protein. 23 309 IPR023271 -
Pte5g00059 331 Pfam Major intrinsic protein 58 291 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte5g00059 Pte-Chr5 906090 908275 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte5g00059 9 304 Major Intrinsic Protein MIP AT3G61430 29.393 1.25e-27 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte5g00059 - K09866 qsa:O6P43_002075 458.759