Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte5g00058 ATGGCTTTGTATATTCCTCCACTGAATACAAGAGGAGCTGAATGGAACAACAGGATCCTTCCAAAAGAGAATCCTCTTACATACTTCAGTGAACTTAAAAATGGAATATTGTCGCCTTCTCCGTTAAGTTGTAGTCATCTTCTGAATTTATATAAGTTGACAACTACAATGACACTTGGGTTTGCATACTGCTATGATCCCTTGGATCCAAACGGGAATGTTACTGTCACTTTCGACATTTTGCAGTGGACCGTTGATGGGTATCTGGCAAGGGTAACTATCCAAAATTATTATCAATATCGTCATATTGATAGACCCGGTTGGAAGCTTGGCTGGACATGGCCCAAGAATGAGATCATTTGGTCAATGCGTGGTGCTTTTGCAACTATGCAAGGGAATTGCTCATTCTTCAAGACTCAGATACCACACTCCTGTGAGAAAAGCCCTGTCATAGAGGATCTCAGTGTAGATGCCCCATGGGAAAACAAGTCTGACAACTGCTGCCACGGTGGTCTTCTTTCTGCCTGGGCTATTGATCGTTCAACTTCATTTGCCTCCTTTGAAATGACAGTGGGCAACCTGCAAGCTAACAGTACTGGTAATGCACCTCAAGATCTTACCTTGTTGGCTACAGGTCCTGGTTACACATGTGATCCAGCTGTGGACACCGCTCCCACAATGACTGTTGTTGATGGGAGAAGACGTGTTCAGGTTTACAGAACATGGAAATCAACCTGCACCTACTCCACTTTTATTGCAAAAAAGAAACCTGTATGCTGTGTTTCTATGTCAACCTTTTACAATCCCAATGTTACACAATGTCCTAAATGCAGCTGTGGATGCCGAGAAGCAGATGATAGTGTATCTTCATGTGTAAGCGATGCCAATCCCTCATCATTATCAGATAATTTAGAAGATGATGCAGTACGGTGCACAGATCACATGTGCCCAGTTCAAGTTCATTGGCATGTAAAAAATAATTATATGGATTACTGGAGGGTGAAACTCACAATTTCTAATCACTATTACAAGAAAACGTACGCAGGCTGGAATGTATTGGTTCAGCATCCTGGTTTCAGCCAACCTGCGGAGGCATATAGCTTCAACAGCACATTACTCCCCCCAGTTGGACTTGGAGATGAAGCTGCTCTCTTTTGGGGGATTGAGTACTATAATACTGAATTGTTACATTCAGACCCATATCAACTTGGATCAGTAACAACAGAAATACTATTGAAGAAGGAGTTGAATCAGTTTACCTTACACAGTGGATGGGCATTCCCTCGAAGGATATATTTCGATGGTGAGATTTGTGAGATGGCCTTACCAGAGACATACCCTACGCTACCAAATGGCGCCACCAATTTTAGACCTACTCACTGCAATTTGTTGCTTATCTTCTTCACATATATCGTTTTCAACGCATTACTTTAA 1434 0.4219 MALYIPPLNTRGAEWNNRILPKENPLTYFSELKNGILSPSPLSCSHLLNLYKLTTTMTLGFAYCYDPLDPNGNVTVTFDILQWTVDGYLARVTIQNYYQYRHIDRPGWKLGWTWPKNEIIWSMRGAFATMQGNCSFFKTQIPHSCEKSPVIEDLSVDAPWENKSDNCCHGGLLSAWAIDRSTSFASFEMTVGNLQANSTGNAPQDLTLLATGPGYTCDPAVDTAPTMTVVDGRRRVQVYRTWKSTCTYSTFIAKKKPVCCVSMSTFYNPNVTQCPKCSCGCREADDSVSSCVSDANPSSLSDNLEDDAVRCTDHMCPVQVHWHVKNNYMDYWRVKLTISNHYYKKTYAGWNVLVQHPGFSQPAEAYSFNSTLLPPVGLGDEAALFWGIEYYNTELLHSDPYQLGSVTTEILLKKELNQFTLHSGWAFPRRIYFDGEICEMALPETYPTLPNGATNFRPTHCNLLLIFFTYIVFNALL* 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte5g00058 477 PIRSF COBRA 39 477 IPR006918 GO:0010215|GO:0016020
Pte5g00058 477 PANTHER PROTEIN COBRA 55 463 IPR006918 GO:0010215|GO:0016020
Pte5g00058 477 Pfam COBRA-like protein 88 249 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte5g00058 Pte-Chr5 901445 904298 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte5g00058 65 473 COBRA Gene Family AT3G29810 47.585 2.36e-140 409
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte5g00058 - - jre:109006563 605.905