Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte5g00043 ATGTTTCTGTACCTTCTTGTTCTTGACAATAATATCACAATTCAAAAAGTCTGGCAAGCCACATTGAGAATGACTGAGCTCTTTCCTTGCAGAAGAACTGCGACCCCAAGGCCTGTCTGGACAGCAGCTTCCCAGATTCTGATGGCCGTGGGATACATAATCATGGCCTTGGCTGTGCCTGGTTCCCTCTACTTTGGATCCATCCTGGTGGGCATATGCTATGGAATTCGTGTAGCTATAACAGTCCCAACTGCTTCAGAGCTTTTTGGGCTAAAGTATTATGGTCTCATCTACAACATTCTGATACTCAACCTTCCCCTGGGCTCTTTCCTGTTCTCTGGTCTGCTTGCTGGTATCTTATATGATATGGAGGCTACGACTAAAGCTGGAGGTGGCAACACTTGTGTCGGAGCTCATTGTTACAGGCTTGTATTTATCGTCATGACTGCAGCTTGCATCGTTGGGTTTTGTTTGGACATTCTCCTGTCGATCAGAACAAAGAATGTGTATGCTAAGATTTCCATGAGCAAGGAATCAAAGAAGTCTACTTCATCATCCAGAACTAGATGA 570 0.4474 MFLYLLVLDNNITIQKVWQATLRMTELFPCRRTATPRPVWTAASQILMAVGYIIMALAVPGSLYFGSILVGICYGIRVAITVPTASELFGLKYYGLIYNILILNLPLGSFLFSGLLAGILYDMEATTKAGGGNTCVGAHCYRLVFIVMTAACIVGFCLDILLSIRTKNVYAKISMSKESKKSTSSSRTR* 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte5g00043 189 Gene3D MFS general substrate transporter like domains 32 170 IPR036259 -
Pte5g00043 189 SUPERFAMILY MFS general substrate transporter 39 169 IPR036259 -
Pte5g00043 189 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 25 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte5g00043 Pte-Chr5 813453 814022 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte5g00043 31 187 Nodulin-like Gene Family AT4G34950 71.975 1.26e-78 243
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte5g00043 - - qsa:O6P43_011474 227.254