Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte5g00042 ATGGGTTTCTTTCACCATTCTCCTCCTTCTACTTTTTCAACGTCAAGCAAATGGCTAGGATTTGTGACCGCTGTTTGGATCCAAGCAATTTCAGGCAACAATTACACATTCTCCAATTACTCTGCTGCAATTAAATTGCTCATGAATCTTACCCAGCTTCAGCTCAACAACCTTTCAGTAGCCAAAGACATTGGCAAAGCTTTTGGTCTTCTTGCTGGCCTCGCTTCTGATCGTTTCCCAACTTGGGTCATTCTTCTTATTGGTTCTCTTGAAGGTCTAATTGGCTATGGCGTCCAATGGCTTGTTGTCAGCCAGAAAATCCAGCCTCTACCTTATTGGCAGATGTGTATATTCTTGTGCATGGGAGGCAACAGCACAACATGGATGAACACCGCAGTGCTTGTCACCTCCATTCGCAACTTCCAAAAAAACAGAGGACCGGTCTCTGGCATTCTCAAGGGCTATGTTGGATTGAGCACCGCCATATTCACCGATGTCTGCACCGCGCTCTTCTCTGCTGATCCAGCTTCCTTCCTCCTCATGCTTGCCATCGTCCCGTTTGCAATATGTCTTGCCGGAGTTCTCTTCCTCCGTGAGTCTCCTCCCGCCTCTACATCCGACGAAGAGAACCAAGAATCCAAGTACTTCGGTGTATTAAATACGGTTGCCGTCATCGTTGCCGTTTATCTCTTAGCCTACGACCTCATACCCAACCCCAGCAGTTCCCTATCTCGAATTTTCTCTGTCATTTTGCTCATCCTATTGGCTGCCCCTGTCGTAATACCTATCCACTCTTACTTAAAGACCCGTTACTCAATCCGGAATGACCAGATAACAGACGTCGAAGTGCAGACGAGTGAACCGTTGCTGAAGGAGGAGGAGAAGGGGGCAGAGGAAGAGGCAGTGATATTTAAGCCAACTCCAGCAGCGGAAGAAGAGGTTGCGGCGGTGAAGAGAAGGCCGATAGTGGGGGAAGAGCACACGATATTAGAGGCTCTGCTGACCGTAGATTTCTGGATCTTGTTCTTATCGTTTCTCTGTGGAGTGGGTACGGGTCTGGCCGTTATGAACAACATGGGTCAGATCGGTTTAGCTCTGGGATACGTCGACGTTTCTATCTTCGTTTCACTTACCAGTATTTGGGGATTCTTTGGTCGGATCATCTCGGGTTCGATTTCCGAATACTTCATCAAGTAA 1197 0.4779 MGFFHHSPPSTFSTSSKWLGFVTAVWIQAISGNNYTFSNYSAAIKLLMNLTQLQLNNLSVAKDIGKAFGLLAGLASDRFPTWVILLIGSLEGLIGYGVQWLVVSQKIQPLPYWQMCIFLCMGGNSTTWMNTAVLVTSIRNFQKNRGPVSGILKGYVGLSTAIFTDVCTALFSADPASFLLMLAIVPFAICLAGVLFLRESPPASTSDEENQESKYFGVLNTVAVIVAVYLLAYDLIPNPSSSLSRIFSVILLILLAAPVVIPIHSYLKTRYSIRNDQITDVEVQTSEPLLKEEEKGAEEEAVIFKPTPAAEEEVAAVKRRPIVGEEHTILEALLTVDFWILFLSFLCGVGTGLAVMNNMGQIGLALGYVDVSIFVSLTSIWGFFGRIISGSISEYFIK* 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte5g00042 398 SUPERFAMILY MFS general substrate transporter 34 396 IPR036259 -
Pte5g00042 398 Pfam Nodulin-like 17 263 IPR010658 -
Pte5g00042 398 Gene3D MFS general substrate transporter like domains 18 215 IPR036259 -
Pte5g00042 398 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 18 397 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte5g00042 Pte-Chr5 811719 813278 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte5g00042 17 398 Nodulin-like Gene Family AT4G34950 68.000 0.0 560
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte5g00042 - - qsa:O6P43_011474 577.015