Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte4g01307 ATGTGGTTGCCACCAGGTAACGTGGAGAAGGAAGACATCCATGGTTTGGTGGCAGTGGCAATAGACAAGGACAAAGGTAGCCAAAATGCACTCAAATGGGCCATTGATCATCTTATAAAGAAGGAACACACTGTTATCCTTATCCATCTCTATCTGTGCCAAATACATTGCAAGGACGTCGTATTAGAAGATGCAGATGTTGCAAACGCTTTAATAGAATACGTTTCTCATGCAGCAATAGAACACTTGGTTGTTGGTTCACCAACAAAAAGTGGTTTGCTGAAAAGATTCAAGTGGATAGACATTCCTGGGGCTGTATCGAAAGGTGCTCCAGATTTTTGTACTGTTTATGTTGTCAGTAAAAGGAAGCTTCAGTCAATGCGATTAGCCTCTCGTCCTGCGCTTACCGTCTCCCCTCTGCATAATCAACTTATGTCTCAATCCTCCACTAGAATAGAGCAACCTACAGAGCCTCACATATCCCAGCCTAATAGTTGTCGAGGATGTGTGACAAGAGATCCCATGAGACCCCATGTAGAATGCCAGATGAAACAGACTCCATCAGATGCAGACATATCCTTTGTAAGCTCAGGGAGGCAAAATACAGATCGTTTGTTCCGTTCGCTGTGCAACGACAATTCAGACACAGTGACGGTTACTGATTCCCCATCATTTGGCTCATTAGATATAGACTCAAGTACTAGCAGTTTTGAGTCCGTGCACTATGTACGCCGGTCACTGGATATTCCCAATAGTAATCAGGAGCTCTCCACAGCCTCACAAGAAAGTGAGCCTATATCAACTTCATCACAGCCAATGGACGATGTCGAAGCTGAAATAAGAAGACTGGAGCTGGAGCTCAAGCAGACAATGGGTATGTACAGTGCAGCTTGCAAAGAGGCCCTCAATGCAAAGCAAAAGGCAGTAGAACTTCAGCGTTGGAAAATAGAGGAAGAGCGGAGACTGGAAGAGGCAAGACTTGCACAAGAAGCTGCATTGGCGATTGTAGAAAAGGAGAAGCCCAAGTCTAAAGCAGCCATGGAGGCTGCTGAGGCAAACAGACGGATCGCCGAACTAGAAGCTCAAAAGAGAATTAATGCAGAGAAGAAAGCACTTAGAGAAGCAGAAGAAAAGAAAAAGGCACTGAATTCTTTGACACACACGGATGTCAGGTGTAGAAGGTACGCCATAGAGGAGATTGAAGCTGCCACTGAGAACTTTGCATCATCAAGAAAAATAGGGGAAGGAGGATATGGCCCTGTATTCAAATGCCATCTTGACCATACTCCAGTTGCTGTTAAGGTTTTACGACCTGATGCAGCACATGGACGATCACAGTTCCAACAAGAGGTTGAGGTGTTGAGCTGCATAAGACATCCGAACATGGTGCTACTTCTTGGAGCCTGTCCTGAATATGGTTGCTTGGTTTTTGAATACATGGCTCATGGGAGTTTGGAGGATCGTCTAATTCGCCGAGGAAACAGTCCACCCCTTTCATGGCAGCTCAGATTTAAGATTGCAGCAGAAATCGGCACTGGTTTGCTGTTCTTACACCAGACAAAACCAGAGCCACCAGTACACCGTGATCTGAAACCAGGTAACATCTTGCTCGACAGCAATTATGTCGCCAAGATCAGCGATGTCGGCCTGGCAAGACTCGTGCCTCCATCTGTGGCCGAGAGTGTAACACAATATCGCATGACATCTACTGCTGGCAGTTTCTGCTATATTGATCCGGAGTATCAGCAGACAGGAATGCTTGGTGTGAAGTCTGACATATACTCACTTGGAATCATGTTCCTGCAGATAATAACAGCGAAACCACCAATGGGGTTAACTCACCATGTTAAAAGAAGCATTGAGAAAGGAACGTTTAGCCAGTTGCTGGATCCAGCAGTGATTGATTGGCCAGTTGAAGACGCCTTGAACTTTGCCAAGTTGGCACTCAGGTGTGCAGAGTTAAGGAGAAAGGACAGACCTGACCTTAGCAAGGTTATCTTGCCTGAACTTGACAGATTGAGAGACTAG 2028 0.4566 MWLPPGNVEKEDIHGLVAVAIDKDKGSQNALKWAIDHLIKKEHTVILIHLYLCQIHCKDVVLEDADVANALIEYVSHAAIEHLVVGSPTKSGLLKRFKWIDIPGAVSKGAPDFCTVYVVSKRKLQSMRLASRPALTVSPLHNQLMSQSSTRIEQPTEPHISQPNSCRGCVTRDPMRPHVECQMKQTPSDADISFVSSGRQNTDRLFRSLCNDNSDTVTVTDSPSFGSLDIDSSTSSFESVHYVRRSLDIPNSNQELSTASQESEPISTSSQPMDDVEAEIRRLELELKQTMGMYSAACKEALNAKQKAVELQRWKIEEERRLEEARLAQEAALAIVEKEKPKSKAAMEAAEANRRIAELEAQKRINAEKKALREAEEKKKALNSLTHTDVRCRRYAIEEIEAATENFASSRKIGEGGYGPVFKCHLDHTPVAVKVLRPDAAHGRSQFQQEVEVLSCIRHPNMVLLLGACPEYGCLVFEYMAHGSLEDRLIRRGNSPPLSWQLRFKIAAEIGTGLLFLHQTKPEPPVHRDLKPGNILLDSNYVAKISDVGLARLVPPSVAESVTQYRMTSTAGSFCYIDPEYQQTGMLGVKSDIYSLGIMFLQIITAKPPMGLTHHVKRSIEKGTFSQLLDPAVIDWPVEDALNFAKLALRCAELRRKDRPDLSKVILPELDRLRD* 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte4g01307 675 MobiDBLite consensus disorder prediction 251 275 - -
Pte4g01307 675 Coils Coil 342 385 - -
Pte4g01307 675 ProSiteProfiles Protein kinase domain profile. 407 670 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte4g01307 675 SUPERFAMILY Protein kinase-like (PK-like) 387 666 IPR011009 -
Pte4g01307 675 SMART serkin_6 407 670 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte4g01307 675 Pfam Protein kinase domain 408 664 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte4g01307 675 Gene3D Phosphorylase Kinase; domain 1 372 479 - -
Pte4g01307 675 MobiDBLite consensus disorder prediction 251 274 - -
Pte4g01307 675 PANTHER OS02G0152300 PROTEIN 17 675 - -
Pte4g01307 675 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 17 97 - -
Pte4g01307 675 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 379 479 - -
Pte4g01307 675 Gene3D Transferase(Phosphotransferase) domain 1 480 675 - -
Pte4g01307 675 CDD STK_N 16 121 - -
Pte4g01307 675 Coils Coil 273 293 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte4g01307 Pte-Chr4 43844987 43848606 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte4g01307 1 675 Receptor kinase-like Gene Family AT1G78940 55.362 0.0 728
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Pte4g01307 Pkinase 2.6e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte4g01307 - - qsa:O6P43_019335 905.975