Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte4g01306 ATGCCGTCGTTTGGTGAAACTGAAAGTGAAATCCTCCTCCGGTTCAAGGAACCATTGACAGGCAATACTGCATTGAGCAACTGGAACAATGCAACAGACATCTGCACTTGGACAGGTGTAATATGTCAGAAGGGGATTTTTCGTGTTTTAAGGCTTGAAAACCTTGGACTAGGGGGTGTGCTTGACATGGACAGCTTGGCACTATTGACAAACTTGAGGAGCTTCAGTATCAAAGGCAACAACTTCTATGGTCAAATGCCTGCAGTTAACAAGATTGGTTCTCTCAGGATGTTGTATTTGTCAAACAACAAGTTCTCAGGTCAAATTCCTGATATTGCTTTTCAGGGTATGGGTAGCTTGAAGAAGGTATATCTGGAAGGAAATGGATTTACAGGAGACATCCCTATATCCCTTGTTGATTTGGCTCAACTCAATGAATTGGACTTGTCAAGTAACCATTTTGAAGGCCAGATTCCTGGTTTTCAACAAAGGTTCATAGTGTTCAGTCTAGCCAATAATCTACTTGAAGGCCCCATTCCAGCTAGCCTAAGCAACATAAGTCCGGTCGCATTTGCAGGGAACAAAGGACTTTGTGGACCACCTTTAGCGGCATGCAGCGTGGTCTCGACTGAGAACAACACGAATCATCCAAAAAACTTGACTGTGATAATTGTGGTCGTCGTTATTGTGTTTGCAGCAGCGGTAATAGCGGCATTATACTATGTAAAATACCGGCGAACCAAGAATTCACAGAAGAAATGGCAACAAGATCCAGAAGTCAATGAGATGGCGACGACCAAAACCGATAAAGGGCCGAAAGAGATGGAGACTTCTGGGTTCTACTCAAGTGGCTTCAGAGAAAGTAAAGATGGTGAATTGCAGTTCGTCAGAGAAGACAAGGGGCGATTTAATATGCAAGAACTACTTAAGGCCTCAGCTCAAGTCTTGGGTAATGGTAGCCTTGGATCTAGTTACAAGGCCGTTGTTTCAACTGGGGCTGCTTTTTCTGTCAAGAGGTTCAAACACATGAACAACGTTGGCAAACAAGAGTTCTATGCACACATGAAAAAGCTAGGACGGTTGTCACATCCTAATATCCTTCCTCTTGTGGCATTCTACTACAGAAGAGAAGAGAAGCTTTTGGTTTATGACTTCGTTGACAATGGGAGCTTGGCCAGTCATCTCCATGTAAAACGTGCTCCTGGTGAACCAAGTAGTCTTGACTGGCCCACTCGGTTGAAGATTATCAAAGGTGTAGCTAGGGGCCTGGCTTACCTGTACAGTGAGTTCCCTAAGGAAATGATTCCACATGGTCATCTAAAATCATCTAATGTACTATTAGACCAGAATTTTGAGCCACTGTTGACTGAATATGGACTAGTTCCTGTGGTGAGCAAGAACCATGCCAATCAACACTTGGCAGCATACAAGTCTCCAGAAATGACTGAATACGATCGTCCGACGAGAAAGACGGATGTATGGTGTCTGGGGATTCTGATTCTTGAGTTGCTGACAGGGAAATTCCCATCCAACTATCTGAAGCATGGAAAGAAAGGTAACACAGATTTGGCTGCATGGGTGAACTCTGTGGTCATGGAGGAGTGGACTGGGGAGGTGTTTGATAAAGAGATGATCAAAGGGATAAGGAATGGGGAAGGTGAAATGTTGAAGCTGTTGAAGATTGGAATGTGTTGTTGTGAATGGGGTGCAGAAGAAAGGTGGGATTGGAGAGAAGCAGTTGGCAAAAATTGA 1752 0.4401 MPSFGETESEILLRFKEPLTGNTALSNWNNATDICTWTGVICQKGIFRVLRLENLGLGGVLDMDSLALLTNLRSFSIKGNNFYGQMPAVNKIGSLRMLYLSNNKFSGQIPDIAFQGMGSLKKVYLEGNGFTGDIPISLVDLAQLNELDLSSNHFEGQIPGFQQRFIVFSLANNLLEGPIPASLSNISPVAFAGNKGLCGPPLAACSVVSTENNTNHPKNLTVIIVVVVIVFAAAVIAALYYVKYRRTKNSQKKWQQDPEVNEMATTKTDKGPKEMETSGFYSSGFRESKDGELQFVREDKGRFNMQELLKASAQVLGNGSLGSSYKAVVSTGAAFSVKRFKHMNNVGKQEFYAHMKKLGRLSHPNILPLVAFYYRREEKLLVYDFVDNGSLASHLHVKRAPGEPSSLDWPTRLKIIKGVARGLAYLYSEFPKEMIPHGHLKSSNVLLDQNFEPLLTEYGLVPVVSKNHANQHLAAYKSPEMTEYDRPTRKTDVWCLGILILELLTGKFPSNYLKHGKKGNTDLAAWVNSVVMEEWTGEVFDKEMIKGIRNGEGEMLKLLKIGMCCCEWGAEERWDWREAVGKN* 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte4g01306 583 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 63 158 - -
Pte4g01306 583 Gene3D Transferase(Phosphotransferase) domain 1 386 583 - -
Pte4g01306 583 Pfam Leucine rich repeat N-terminal domain 8 42 IPR013210 -
Pte4g01306 583 Pfam Protein kinase domain 314 579 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte4g01306 583 Gene3D Ribonuclease Inhibitor 5 205 IPR032675 -
Pte4g01306 583 MobiDBLite consensus disorder prediction 251 281 - -
Pte4g01306 583 SUPERFAMILY L domain-like 27 201 - -
Pte4g01306 583 ProSiteProfiles Protein kinase domain profile. 310 583 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte4g01306 583 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 7 580 IPR046959 -
Pte4g01306 583 SUPERFAMILY Protein kinase-like (PK-like) 314 580 IPR011009 -
Pte4g01306 583 Pfam Leucine rich repeat 94 154 IPR001611 GO:0005515
Pte4g01306 583 Gene3D Phosphorylase Kinase; domain 1 277 385 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte4g01306 Pte-Chr4 43841748 43844385 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte4g01306 2 582 Receptor kinase-like Gene Family AT4G31250 47.249 0.0 552
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Pte4g01306 Pkinase 6.5e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte4g01306 - - qsa:O6P43_019333 676.781