Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte4g01301 ATGGAGCCAAAATCGGCGGCTTACGCTGGCCGATCAGACATGAAGAAAAGCCCGTCCGAGCTGGCTCTTGAAGAGTTTCTCAAGAAAACAAAGACCGAAGCCGATTCTGTCACCATCTCTGACAAAGACGACAGAGAGAAAGATGGAATTTTCTCTGACATCCATGGCTTACTCGGTGATTTTTACTCCGGCGAATTCAATGAAGCTTTCAGAAATGGGGACAGCCTGACTAGTTTCCCAACTTGTGCTGGACTTCATGATGCTCCTTTATGGTCTCAGCAAGGGACTCCTCCCAAGCACTCTAGCATCTCTGCTACTATTGATTCTCAGTCATCTGCTTGTGATAATGCTGGTAGTCCTGTGTCAGCTAATAGACCAAAAGGCAGAGACAATCAAGCCAAAGAAGCGAGCAGTGGATCGTCACACGAAGTGTCTGATGAAGATGATGAAACTGGTCCTTGTGAAGAAAGCACGGACCCTGTTGACTTGAAACGACTTAGAAGGATGGTCTCGAACCGAGAATCTGCCAGGAGATCAAGAAGAAGAAAACAAGCACATTTAGCTGAGCTTGAAACGCAGGTTGAACAACTTAGGGTGGAAAACGCAACTCTTTACAAGCAGTTCACAGATGCCAGTCAGCAGTACCGTGAGGCTGACACGAACAATCGAGTGCTCAAATCAGACGTGGAAGCTTTAAGAGCGAAGGTGAAGTTGGCTGAAGATATGGTTGCAAGGGGCTCCTGCAGTTTAAACCAGATGCTGCAAAGTCACATCAGCACACCCCAACAGCTAACCTCAAATAATATACGGAGCATGGCACACGTCTCGCCGTCTATCGCTGTTCAAGCAGACGAGGCCTCATTTGCAGCAATGTCACTTTCTGCACAGAACTCAGTCCTTGGACTTGGAAGCATTGATATCAGGAATAGCAATATCAAGGCCGCAGGGGTCATGAGTAATGCAATGAGCTGTGTGTCTGACATGTGGCCATCGTCAGTGTAG 1002 0.475 MEPKSAAYAGRSDMKKSPSELALEEFLKKTKTEADSVTISDKDDREKDGIFSDIHGLLGDFYSGEFNEAFRNGDSLTSFPTCAGLHDAPLWSQQGTPPKHSSISATIDSQSSACDNAGSPVSANRPKGRDNQAKEASSGSSHEVSDEDDETGPCEESTDPVDLKRLRRMVSNRESARRSRRRKQAHLAELETQVEQLRVENATLYKQFTDASQQYREADTNNRVLKSDVEALRAKVKLAEDMVARGSCSLNQMLQSHISTPQQLTSNNIRSMAHVSPSIAVQADEASFAAMSLSAQNSVLGLGSIDIRNSNIKAAGVMSNAMSCVSDMWPSSV* 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte4g01301 333 Pfam bZIP transcription factor 163 214 IPR004827 GO:0003700|GO:0006355
Pte4g01301 333 Coils Coil 173 207 - -
Pte4g01301 333 Gene3D - 163 220 - -
Pte4g01301 333 PANTHER BASIC LEUCINE ZIPPER 63 5 312 - -
Pte4g01301 333 MobiDBLite consensus disorder prediction 89 163 - -
Pte4g01301 333 FunFam BZIP transcription factor 162 213 - -
Pte4g01301 333 Coils Coil 215 242 - -
Pte4g01301 333 SMART brlzneu 160 224 IPR004827 GO:0003700|GO:0006355
Pte4g01301 333 CDD bZIP_plant_GBF1 165 216 IPR045314 GO:0003700|GO:0006355
Pte4g01301 333 Pfam Basic leucine-zipper C terminal 231 328 IPR020983 -
Pte4g01301 333 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 162 225 IPR004827 GO:0003700|GO:0006355
Pte4g01301 333 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 167 182 IPR004827 GO:0003700|GO:0006355
Pte4g01301 333 MobiDBLite consensus disorder prediction 94 119 - -
Pte4g01301 333 SUPERFAMILY Leucine zipper domain 164 215 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte4g01301 Pte-Chr4 43816018 43819397 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte4g01301 14 330 bZIP Transcription Factor Family AT5G24800 45.679 1.29e-74 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pte4g01301 bZIP_C 2.8e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte4g01301 K25784 - qsa:O6P43_015554 380.563