Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte4g01289 ATGGACAAGTACGAGAAGTTGGAGAAGGTTGGGGAAGGGACATATGGAAAGGTGTACAAGGCAAAGGAGAAGGCAACGGGACAGTTAGTGGCACTCAAGAAGACCCGGCTGGAGATGGACGAGGAGGGTGTTCCTCCCACTGCCCTCCGGGAGGTCTCTTTGCTCCAGCTGCTCTCCCAGTCTCTCTACGTCGTCCGCCTCCTCTGTGTGGAGCACGTCGACAAGCCACCCAAGAATCATCCACGAAACGATAAGAACCGCAAGCCACTTACTAATACTACCACTACCACCGAATCTGCAGATGCTAGTAATGTTAATGCCACGGACAGCAGACATGGTAATGTTGATGGCCATGTCAACAATAACATCCCGACCCGCCCTCTCCTTTATCTCGTCTTCGAGTACCTGGACACAGATCTCAAGAAATTCATCGACTCCCACCGCAAGGGCCCAAATCCAAGGCCCCTCCCCCCTTCTCTTATCCAAAACTTTCTCTTCCAGCTCTGCAAAGGCGTTGCCCACTGCCACAGCCATGGCGTCCTTCATCGCGATCTCAAGCCTCAGAACCTTCTCCTTGATCAGCAAAAGGGTATCCTAAAGATCGCTGATCTAGGTCTCGGACGCGCCTTCACCGTCCCTCTCAAGAGTTACACTCATGAGATCGTCACCCTCTGGTATAGGGCTCCCGAGGTCCTCCTTGGCTCCACCCACTACTCCACGGCCGTTGACATCTGGTCCGTCGGTTGCATATTCGCTGAAATGGTGAGACGCCAAGCTCTCTTCCCTGGAGACTCTGAATTCCAGCAGCTCCTTCATATTTTCAGGTTGCTGGGCACTCCAACCGACAAGGAATGGCCTGGAGTTACCTCCCTGCGGGACTGGCATGTTTATCCACAGTGGGAACCTCAAAGTTTGGCACGTGCAGTTCCCTCCTTAGGACCTGATGCTGTTGACCTTCTTTCGAAAATGCTCAAGTACAACCCAGCCGAGAGAATTTCAGCCAAGGCAGCATTGGACCATCCTTACTTTGACAGTTTAGACAAATCTCAGTTCTGA 1056 0.5256 MDKYEKLEKVGEGTYGKVYKAKEKATGQLVALKKTRLEMDEEGVPPTALREVSLLQLLSQSLYVVRLLCVEHVDKPPKNHPRNDKNRKPLTNTTTTTESADASNVNATDSRHGNVDGHVNNNIPTRPLLYLVFEYLDTDLKKFIDSHRKGPNPRPLPPSLIQNFLFQLCKGVAHCHSHGVLHRDLKPQNLLLDQQKGILKIADLGLGRAFTVPLKSYTHEIVTLWYRAPEVLLGSTHYSTAVDIWSVGCIFAEMVRRQALFPGDSEFQQLLHIFRLLGTPTDKEWPGVTSLRDWHVYPQWEPQSLARAVPSLGPDAVDLLSKMLKYNPAERISAKAALDHPYFDSLDKSQF* 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte4g01289 351 Pfam Protein kinase domain 4 343 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte4g01289 351 PANTHER CELL DIVISION PROTEIN KINASE 1 343 - -
Pte4g01289 351 MobiDBLite consensus disorder prediction 74 119 - -
Pte4g01289 351 ProSitePatterns Serine/Threonine protein kinases active-site signature. 180 192 IPR008271 GO:0004672|GO:0006468
Pte4g01289 351 Gene3D Transferase(Phosphotransferase) domain 1 136 343 - -
Pte4g01289 351 Gene3D Phosphorylase Kinase; domain 1 1 86 - -
Pte4g01289 351 FunFam Cyclin-dependent kinase 2 139 350 - -
Pte4g01289 351 SMART serkin_6 4 343 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte4g01289 351 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
Pte4g01289 351 SUPERFAMILY Protein kinase-like (PK-like) 1 346 IPR011009 -
Pte4g01289 351 ProSiteProfiles Protein kinase domain profile. 4 343 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte4g01289 351 MobiDBLite consensus disorder prediction 88 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte4g01289 Pte-Chr4 43743303 43745617 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte4g01289 1 352 Core Cell Cycle Gene Families AT3G54180 75.000 0.0 533
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-Pl Pte4g01289 Pkinase 3e-62 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte4g01289 K07760 - qsa:O6P43_016425 556.984