Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte4g01282 ATGGTTCGGCAGGCAGCAATGGCTATCAAGTGTATTTTTTTGATCTATTACAAAAACAGCAGAGGCCATACCTATCGTAAGCAGGGCCAATTGCTGACTTCAGTTGAGTATCTGTTACTGCTTTATCGTGCCTTGCTACCGGCAACAGTCTGGGATCGTTTTTTCTTGAACAAGGATTATGGAAGTCTCTTTTCGTCCCTAATGACTGGGTTATATCTGACATTCAAGCTCACATCTGTTGTTGAAAAGGTGCAATCCTTTTTTGCTGCACTGAAGGCTCTTTCACTTAAAGAGGTGCATTATTGGGCTTATGCAACATTGGAGCAGGTTAATTCCGCAGGGGACTTGTGTGCTATCTGCCAGGAGAAAATGCATTCTCCAATTTTGCTTCGATGA 396 0.4293 MVRQAAMAIKCIFLIYYKNSRGHTYRKQGQLLTSVEYLLLLYRALLPATVWDRFFLNKDYGSLFSSLMTGLYLTFKLTSVVEKVQSFFAALKALSLKEVHYWAYATLEQVNSAGDLCAICQEKMHSPILLR* 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte4g01282 131 PANTHER UNCHARACTERIZED RING FINGER-CONTAINING PROTEIN 1 131 IPR044235 GO:0061630|GO:1904294
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte4g01282 Pte-Chr4 43679869 43683046 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte4g01282 1 131 C3H Transcription Factor Family AT5G01960 82.443 3.11e-74 225
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte4g01282 - K22379 vvi:100250131 221.476
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte4g01282 4 43679869 43683046 Pte4g01282 4 43679869 43683046 RCT