Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte4g01278 ATGCATCACGAGACGGCTAGCTGCTTGCTTGTTAAGGAACTCAATGATAACAATGACCTTGTTACCATGCCTAACGTCGTATTACCTGTGTATCTGTATTTTACTTGGTCATATGGTTATGTACTTATTTTCTTGAGAAGTTACATGTCATCTTCACAAGCAGGTGATAAGTATCTGAAGCCTTTTGTGACACCGGAGCCTGATGTAACTGTCACAAAAAGATCACCATGTGATGAATGCTTAATCGTCGCAACAGATGGTTTGTGGGATGTTATTTCAAGTGAATTGACTTGTCATATAGCTCTTAAGTTTCTTGGGGAAGTTGAATATGCAGCAACTGCCACCTCAAACACAAACCTTAATGATGAAATATCCATGGAAGATGGCAACACTCGTGAACCACTGCAAACATCAGGAAGCAGTTTGGCAGCTGCATCGCTCACTCGCCTTGCGTTGGCCAGGAGAAGCTCTGGTAACATCAGTGTCATAGTGGTAGATTTGAAGAGGCTATGA 513 0.4211 MHHETASCLLVKELNDNNDLVTMPNVVLPVYLYFTWSYGYVLIFLRSYMSSSQAGDKYLKPFVTPEPDVTVTKRSPCDECLIVATDGLWDVISSELTCHIALKFLGEVEYAATATSNTNLNDEISMEDGNTREPLQTSGSSLAAASLTRLALARRSSGNISVIVVDLKRL* 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte4g01278 170 CDD PP2Cc 52 167 IPR001932 -
Pte4g01278 170 Gene3D - 35 169 IPR036457 -
Pte4g01278 170 SUPERFAMILY PP2C-like 49 168 IPR036457 -
Pte4g01278 170 PANTHER PROTEIN PHOSPHATASE 51 167 IPR015655 GO:0004722|GO:0006470
Pte4g01278 170 ProSiteProfiles PPM-type phosphatase domain profile. 1 167 IPR001932 -
Pte4g01278 170 Pfam Protein phosphatase 2C 55 109 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte4g01278 Pte-Chr4 43625525 43626037 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte4g01278 39 168 PP2C-type Phosphatase Gene Family AT5G51760 48.148 1.15e-26 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte4g01278 K14497 - qsu:111987714 113.62