Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte4g01273 ATGGTTCTCCATGAACAGGTGATGCAGCAGAAGATGATATTTACTCACTGGGGATGCACTTTGGCTCTTGTATTTTGCCACTTGACTCTCCTGGTTGCTAGAGAGGTTACGGATCCTTCAGAAGTGAATGCATTGCTAGCTGTCAGGAATACTTTAACTGATCCTATGGAGAACCTTAGAAATTGGAATGGGGGCGATCCCTGCACATCAAATTGGACAGGATTGTCATGCTCAGACACATCTAGAGCGGATGGATACTTGCACGTGGAACTGCTCCATCTAATGAATATGAACCTTTCCGGAAGTCTAGTCCCTGAGATAGGCTTGTTGTCTCATCTTAAGATATTGAATTTTATGTGGAATGGGTTAACTGGTGTTATTCCAAAGGATATAGGAAAAATTACATCCCTGAGACTCTTACTGTTGAATGGTAACAACTTGTCTGGCTCTTTGCCTGAGGAGCTTGGGAATCTTATGAACCTTGATAGGTTACAGGTGGACCAAAACCAACTTTCAGGTCCTATTCCAAGATCATTTGCCAACTTAGTTAATGTCAAGCATCTTCACATGAACAACAACTCATTTACTGGTCAAATTCCGCCTGAGCTCTCAGCCCTTCCCAGTCTTTTACATTTGCTTTTGGATAACAACAACTTATCTGGCTATCTTCCGCTTGAGCTGGCCCAGGTTCCAAGCTTGCGTATACTACAGCTTGATAACAACAATTTCGGTGGGGCCAAAATTCCAGAAAGCTTTGGAAGCTTCATCAGCTTAGTGAAACTTAGTCTTCGGAATTGCAGTCTCCAAGGAGCTATTCCTGACATCAGTGGGATACCCAACCTAAACTATTTAGATCTTAGCTTGAATTACCTCATTGGGTCCATACCATCAAGAAACCTCTCGGAGAAGATTACAACTATCAACCTGTCTGATAACCAGCTTAATGAGTCGACCCCTGAAAGCTTTTCACACCTTCCTTTGCTTCAAAGATTGTCACTCCAGAACAACAATCTATCAGGCCCTATCCCTGCGAGCATATGGAAGAACATGTCCTTCAGTAGCAGTGCTAAACTTTGGATTGATTTGCGGAATAACTCGCTGTCTGGCATCTCGGGAGCTTTGGATCCCCCACCTAATGTCACCTTGAGGCTTGCTGGAAATCCTGCCTGCCTGAATTCAAATATACATATAGGTCAATATTGCCAATCTGAACCTGGAGACCCAGACAGTGTTGATTATTTAACAAATTCGAAAATAATCTGTCCTATTCAAGCATGTCCAGTGGACAATTTCTATGAATATGTTCCAGCATCCCCTGAGCCATGCTTTTGCGCTTCACCTCTCAAGATTGGATATCGGCTAAAAAGCCCAAGTTTTTCATATTTTCATCCTTATATTTCAGCATTTGAAAGATATGTAACTCAGTCTTTAAGCTTGGACCTTTATCAGCTATCAATCGATACGTTTGCATGGGAAGAAGGACCTCGTCTTAGGATGTATTTAAAACTTTTCCCTGCCTCTGGCAATGCTAGTACTTTCAACAAAAGTGAGGTCCAACGCATTCGATGGATATTTCAATCATGGAGATTTCCTGGCAGTGATTTTTTTGGACCTTATGAGCTTCTGAATTTCACTCTCATTGGACCTTATGTAAATATGAATATCGAGATGGAAGAAAGGAGAATTAGTAAGGGACTTTTGGCTGGTATCGTAATAGCAGCAGTAGCCTGCGCCCTTGCCGTATCTGCAATAGTAAGTTTCATCATCACAAGAAGGCATATGAAGTACCGCTATACACTATCAAGAAAACGCTTATCTTCAGATATTTCTATGAAAATTGATGGTGTAAAGGCATTCACTTTTAAAGAAATGGCTGTAGCTACTGGAAATTTTAGCAGCTCAACTCAAGTTGGCCAAGGAGGCTATGGTAAGGTATACAGAGGCATTCTATCTGATGGAACAACCGTGGCTATAAAACGAGCAGAAGAAGGTTCTTTGCAGGGTCAAAAAGAATTCTTGACCGAGATCGAACTGTTATCGAGGTTGCATCACCGGAACCTTGTTGCATTGATTGGATATTGCAATGAAGAGGGAGAGCAGATGCTGATCTACGAGTTCATGCCTAATGGCAGCTTGAGAAACTGGCTTTCTGGGAAACTTGAACCGAAGGGAAACTTAAATTTTTACACGAGGTTAAGGATTGCAATGGGTTCAGCAAAAGGCATACTCTATCTCCACACGGAGGCCAATCCTCCCATTTTCCACCGAGATATCAAGGCCAGTAATATACTTCTGGATTCCAACCTGACAGCTAAAGTGGCTGATTTTGGACTCTCGCGGCTTGCGCCTCTACTGGAGGATGGAGCTGTGCCTAAGTATGTCTCAACTGTTGTGAAGGGAACTCCCGGTTACCTGGATCCTGAATACTTTCTCACTCACAAGTTGACAGACAAAAGCGATGTCTATAGCCTAGGTATAGTATTTCTGGAGCTCTTGACGGGCATGCAACCCATCTCACATGGAAAAAACATCGTCCGCGAGGTGAACATGGCTCATCAATCGGGTTTGGTGTTTGCCATCATTGACAGCAGAATGGGTTCGTACCCATCAGAGTGCGTCGAGAGGTTTTTAGCTCTGGCTCTCAGTTGTTGCCACGACAAGCAAGAGAAGCGACCGTCGATTCTGGAAGTGGTTAGGCAGCTGGAAACCATTCTTCAAATGATGCCAATATTGCCAGCTGAAACCCAAAGCAGTAGCAGTAGCACCTCCTCCGCAATGTTGTATTCGGTGAAATCTGCATCCTCATCTTCAAATTACATGAGAAGCTGCGAGGAACTCCAGAACCCTCATACGTCCTTCGGTGTCTCCGGGAGTGATCTTGTTAGCGGCGTCACTCCCACCATTACTCCTAGGTGA 2916 0.4362 MVLHEQVMQQKMIFTHWGCTLALVFCHLTLLVAREVTDPSEVNALLAVRNTLTDPMENLRNWNGGDPCTSNWTGLSCSDTSRADGYLHVELLHLMNMNLSGSLVPEIGLLSHLKILNFMWNGLTGVIPKDIGKITSLRLLLLNGNNLSGSLPEELGNLMNLDRLQVDQNQLSGPIPRSFANLVNVKHLHMNNNSFTGQIPPELSALPSLLHLLLDNNNLSGYLPLELAQVPSLRILQLDNNNFGGAKIPESFGSFISLVKLSLRNCSLQGAIPDISGIPNLNYLDLSLNYLIGSIPSRNLSEKITTINLSDNQLNESTPESFSHLPLLQRLSLQNNNLSGPIPASIWKNMSFSSSAKLWIDLRNNSLSGISGALDPPPNVTLRLAGNPACLNSNIHIGQYCQSEPGDPDSVDYLTNSKIICPIQACPVDNFYEYVPASPEPCFCASPLKIGYRLKSPSFSYFHPYISAFERYVTQSLSLDLYQLSIDTFAWEEGPRLRMYLKLFPASGNASTFNKSEVQRIRWIFQSWRFPGSDFFGPYELLNFTLIGPYVNMNIEMEERRISKGLLAGIVIAAVACALAVSAIVSFIITRRHMKYRYTLSRKRLSSDISMKIDGVKAFTFKEMAVATGNFSSSTQVGQGGYGKVYRGILSDGTTVAIKRAEEGSLQGQKEFLTEIELLSRLHHRNLVALIGYCNEEGEQMLIYEFMPNGSLRNWLSGKLEPKGNLNFYTRLRIAMGSAKGILYLHTEANPPIFHRDIKASNILLDSNLTAKVADFGLSRLAPLLEDGAVPKYVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGIVFLELLTGMQPISHGKNIVREVNMAHQSGLVFAIIDSRMGSYPSECVERFLALALSCCHDKQEKRPSILEVVRQLETILQMMPILPAETQSSSSSTSSAMLYSVKSASSSSNYMRSCEELQNPHTSFGVSGSDLVSGVTPTITPR* 972
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte4g01273 971 Gene3D Ribonuclease Inhibitor 38 199 IPR032675 -
Pte4g01273 971 Pfam Protein kinase domain 633 899 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte4g01273 971 SUPERFAMILY L domain-like 53 391 - -
Pte4g01273 971 Pfam Leucine rich repeat N-terminal domain 39 78 IPR013210 -
Pte4g01273 971 FunFam LRR receptor-like serine/threonine-protein kinase HSL2 707 918 - -
Pte4g01273 971 Gene3D Transferase(Phosphotransferase) domain 1 707 921 - -
Pte4g01273 971 CDD STKc_IRAK 637 904 - -
Pte4g01273 971 SUPERFAMILY Protein kinase-like (PK-like) 616 935 IPR011009 -
Pte4g01273 971 ProSitePatterns Serine/Threonine protein kinases active-site signature. 753 765 IPR008271 GO:0004672|GO:0006468
Pte4g01273 971 ProSiteProfiles Protein kinase domain profile. 631 911 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte4g01273 971 SMART serkin_6 631 904 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte4g01273 971 Gene3D Phosphorylase Kinase; domain 1 602 706 - -
Pte4g01273 971 PANTHER RECEPTOR-LIKE PROTEIN 55 49 907 - -
Pte4g01273 971 Gene3D Ribonuclease Inhibitor 301 381 IPR032675 -
Pte4g01273 971 FunFam Probable LRR receptor-like serine/threonine-protein kinase At1g06840 39 200 - -
Pte4g01273 971 Gene3D Ribonuclease Inhibitor 200 300 IPR032675 -
Pte4g01273 971 Pfam Leucine rich repeat 279 338 IPR001611 GO:0005515
Pte4g01273 971 FunFam Leucine-rich repeat protein kinase family protein 595 706 - -
Pte4g01273 971 ProSitePatterns Protein kinases ATP-binding region signature. 637 659 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte4g01273 Pte-Chr4 43586734 43595265 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte4g01273 20 909 Receptor kinase-like Gene Family AT5G01950 62.570 0.0 1073
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Pte4g01273 Pkinase 4.2e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte4g01273 - - qsa:O6P43_016444 1261.51