Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte4g01271 ATGAGGACGCTGCTTTCGAACCCCGAGATAAAATCCTCATCGTCGATTTGGATTCTGTCGACACCGACAATTCAAACACGGCTGTGGTTCTTCACCGGTCCAGGGTTCTTAATGAGCATTGCTTTTCTGGATCCGGGAAATCTTGAAGGGAATCTTCAGGTTGGAGCTATAGTCGGTTACTCACTTCTCTGGTTGCTGATGTGGGCCACGGCTATGGAATTGCTGATTCAGCTATTGTCGGCTAGAATTGGAGTCGCCACCGACCAACACCTTGCCGAGCTGTGCAGGGATGAGTATCCCGATTGGGCCAGATATGTGCTCTGGTTCATGGCAGAGCTGGCCTTGATTGGAGCTGATATTCAAGAGGTCATAGGGAGCTATGGCAGGTTGAATAGGACTGGTCAGGTTGGTGACGTGGTGAAACTGAAGTGTCAATCAAACAGATTTGCAGTAGCAGTAGATCTCATCTGA 471 0.4926 MRTLLSNPEIKSSSSIWILSTPTIQTRLWFFTGPGFLMSIAFLDPGNLEGNLQVGAIVGYSLLWLLMWATAMELLIQLLSARIGVATDQHLAELCRDEYPDWARYVLWFMAELALIGADIQEVIGSYGRLNRTGQVGDVVKLKCQSNRFAVAVDLI* 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte4g01271 156 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 26 127 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pte4g01271 156 Pfam Natural resistance-associated macrophage protein 49 126 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pte4g01271 156 NCBIfam Nramp family divalent metal transporter 33 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte4g01271 Pte-Chr4 43570094 43570564 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte4g01271 27 126 Inorganic Solute Cotransporters AT1G47240 88.000 2.69e-57 185
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte4g01271 K21398 - sspl:121802212 188.734