Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte4g01263 ATGGCTTCTCTGCAGCTTCATCCATCACCAACTCTATCTCCACAGCATATTTCAACTAGAATCTGCTTCAGTCCTTTGACCTCAGCAACGACTCCAATTGCTTTTTCTTATTACTGTACGGACCGTTTTAAGAGCAACCGCGTTAGATGCAATGCAGCTTTTGGAAACATCAATATCAACATCCCAGATAACATGTTGGACATGTTTTATCTGGACCAATATCCTGCTTTTCGATCAGGGTTAGTGCAATTTCAGCATCTAGCTGGGGAATTATCAGATATGCAGAAGTGGGGAATTCTTGTATTTGGTGGGCTTACGTGGATCTACTTAACTGCAAGGCCTGGTGTTCTCATTGGCGCCATGGATGCTTACCTTCTCTCCCCTCTACAACTTGGTTTTGATATTTTGACAGGAAGAAGGAATCTGAAGAGAACTGATTTTCTTATAAGAGATAAGCTTGGTGAAGGCTCGTTTGGTGTAGTTTATTCTGGTGTGGTCGTTCCCAAAAATGTGAGTCTTGATGAGACAAAGCGGAGTAGAGGAAGGGCCAAAGCTCTTGAATTGGATACAAGGTTCAAGGATAAGGTCATTCTTAAGAAGGTTAAAATTGGAGTCCAAGGGGCTCAAGAATGTGGGGAATTTGAAGAGTGGTTCAATTACAGGCTCTCAAGAGCAGCACCTGAAACATGTGCAGATTTCCTTGGAAGTTTTGTTTCCGACACAACCAGTTCAGAATTTGTAAAGGGTGGAAAGTGGCTTGTTTGGAAATTTGAGGGAGATCGAAGTCTTGCTGATTATTTGAAAGATCGCAACTTCCCTTTCAACTTAGAATCTGTCATGTTTGGTCAAGTTTTGCAAGGAGTGGATTCTAAGAGACGAAATGCATTGATCATCAAGCAAATAATGCGCCAGATCATTACATCTTTGAAGAAAATTCATAATACAGGGATTGTTCACAGGGATGTAAAACCAGCCAATTTAGTGGTCACGAAACGTGGGCAGATAAAGCTCATAGATTTTGGTGCTGCTGCTGATCTTCGAATTGGAAAAAACTATGTTCCCGACATTGGCTTACTGGATCCTGACTACTGTCCTCCTGAATTATACGTACTTCCTCAAGAAACTCCAAGTCCTCCTCCAGAGCCAATCGCTGCTTTACTTTCTCCAATCTTATGGCAGGTTCATAATCTCATTCATATAGTGAACTTATCAAGAACTGGTCTTGCATACATGATAACAAGGGAAAAAGAATGGAGTTTGTGA 1263 0.4141 MASLQLHPSPTLSPQHISTRICFSPLTSATTPIAFSYYCTDRFKSNRVRCNAAFGNININIPDNMLDMFYLDQYPAFRSGLVQFQHLAGELSDMQKWGILVFGGLTWIYLTARPGVLIGAMDAYLLSPLQLGFDILTGRRNLKRTDFLIRDKLGEGSFGVVYSGVVVPKNVSLDETKRSRGRAKALELDTRFKDKVILKKVKIGVQGAQECGEFEEWFNYRLSRAAPETCADFLGSFVSDTTSSEFVKGGKWLVWKFEGDRSLADYLKDRNFPFNLESVMFGQVLQGVDSKRRNALIIKQIMRQIITSLKKIHNTGIVHRDVKPANLVVTKRGQIKLIDFGAAADLRIGKNYVPDIGLLDPDYCPPELYVLPQETPSPPPEPIAALLSPILWQVHNLIHIVNLSRTGLAYMITREKEWSL* 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte4g01263 420 Gene3D Phosphorylase Kinase; domain 1 135 257 - -
Pte4g01263 420 Gene3D Transferase(Phosphotransferase) domain 1 283 396 - -
Pte4g01263 420 SUPERFAMILY Protein kinase-like (PK-like) 141 369 IPR011009 -
Pte4g01263 420 ProSitePatterns Serine/Threonine protein kinases active-site signature. 317 329 IPR008271 GO:0004672|GO:0006468
Pte4g01263 420 SMART serkin_6 147 419 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte4g01263 420 ProSiteProfiles Protein kinase domain profile. 147 420 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte4g01263 420 Pfam Protein kinase domain 294 368 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte4g01263 420 PANTHER SERINE/THREONINE-PROTEIN KINASE STN8, CHLOROPLASTIC-RELATED 75 396 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte4g01263 Pte-Chr4 43530664 43534798 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte4g01263 276 373 CBL-interacting serine-threonine protein kinases AT5G57630 28.571 1.80e-08 53.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-4 Pte4g01263 Pkinase 1.7e-17 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte4g01263 - - qsa:O6P43_016456 546.199
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte4g01263 4 43530664 43534798 Pte4g01263 4 43530664 43534798 RCT