Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Pte4g01258 ATGTATAAGTTGAGATCGGAAAGATGCTTTGATACAGCTAATAAAGCTGAAGCTGTTTATGTCGAAACCGATCCATCTGGTACATATGGACGTTTTAGGGATATTCTTGGCAAAGGAGCCATGAAGACGGTTTATAAGGCTTTCGATAAAATTCTTGGCATGGAAGTAGCTTGGAACCAGGCCAAGCTAGGGGATGCATTTCATTCATCAATGGATCTTCAGAGACTTTACTCAGAAGTTCATCTGCTTAAGAATCTCAAGCATGACTCTGTGATGCGCTTTTATGCATCCTGGATTGACGTCAACAGCGGAACCTTCAATTTCATTACTGAATTGTTCACTTCAGGCACCCTTAGAGAGTATACACAGAAGTACCAGCCGTTAAATATTGAAGCAGTCAAGAACTGGGCTCGCCAGATCTTACATGGTCTGGCTTATTTGCACAGCCATGATCCACCAGTGATACATAGGGATCTCAAGTGTGCTAACATCTTCGTCAATGGCCATCTTGGCCAAGTGAAGATGGGTGACTTTGGCCTAGCAGCAGTTCTCCAAGGCTCCCAACCTGCTCACAGTGTCGTAGGTACACCGGAATTCATGGCACCAGAAATATACGAAGAGGAATACAACGAACTAATTGATGTATATTCCTTTGGTATGTGCATGATTGAGATGCTTACTTCCGAATATCCTTACAACGAGTGCTCCAATCCTGCCCAGATATACAAGAAAGTCACCTCGGGAAAGCTACCTGCAGCATTTTACCGTATCCAAGATTTGGAAGCCAGGAAATTTGTGGGAAAATGCCTGGAGAAAGTATCAGAGAGGTCACCGGCTAAGAGTCTCTTGTTAGATCCCTTTTTAGCAGCTGACCAACTTGAATGGACACCTCCAAGGCCAAATCTTCATAGCCGAAAGTCACTTTATGGTGTCACCCTTTCAAAAGATCATCACTCCCAAACTTATCAAACACAGAGCACAAATATGACAATCACTGGGACTATGAACAACGAAGATGATACAATCTTCCTCAAAGTTCAGAAAGCTGATAAAAATGGTCATACCCGGAATATATACTTTCCGTTCGATATCATAAATGACACTGCCATTGAAGTGTCCATGGAGATGGTTAAGGAATTGGATATTAGTGATTGGGAGCCACTGGAGATTGCTGAAATGATAGAGGAGGAGATATCGACCTTAGTCCCAACTTGGAAGAATTGGGGAACATCTCAATTTAATAGACAACACAGCTTAATTTGTGAAGATGATTATGATGTTGACGATCATAGTGATTACTCGTCACCCTCTTCTCGGTCTTCTAATCAAGGTTTTCCTAGGGCTTTAACCAGTCCTGCCCATTTGAGTGGAAACGATGATGGTGTCTATGACTGGCTTCAAGATAATGGATTCGTCTGTGACGAGACTAGTTCGCAAAGCTCAATGAATTCCAGAAAGTGCTCCCACGTGAATTACGTTGATTCCTGCATGGAGGAGGGATATGATGAAATTGCAAGTAGCTCAGACACCCATCTATGTTGCACCCAAGAAGCCAAGAAATATACAAGGTTTTGCCCAGCAGAAGAAACTAGAGCGAACCAAAATCATGATCAGAGACTAAACTCTTGGCAACATGGGTGTTGTAATCAACATCCAAAGCGAACCAGGAGGCGCTCCTATGTTGACATTCGCAGTCAGTTGCTGCACCGATCTTTGATGCAAGAGATAAACCAGAGAAGGATGTTCAAGACAGTTGGGGCAGTAGAAAACATTGGTTTCCAAGAACCCGCATAG 1794 0.4303 MYKLRSERCFDTANKAEAVYVETDPSGTYGRFRDILGKGAMKTVYKAFDKILGMEVAWNQAKLGDAFHSSMDLQRLYSEVHLLKNLKHDSVMRFYASWIDVNSGTFNFITELFTSGTLREYTQKYQPLNIEAVKNWARQILHGLAYLHSHDPPVIHRDLKCANIFVNGHLGQVKMGDFGLAAVLQGSQPAHSVVGTPEFMAPEIYEEEYNELIDVYSFGMCMIEMLTSEYPYNECSNPAQIYKKVTSGKLPAAFYRIQDLEARKFVGKCLEKVSERSPAKSLLLDPFLAADQLEWTPPRPNLHSRKSLYGVTLSKDHHSQTYQTQSTNMTITGTMNNEDDTIFLKVQKADKNGHTRNIYFPFDIINDTAIEVSMEMVKELDISDWEPLEIAEMIEEEISTLVPTWKNWGTSQFNRQHSLICEDDYDVDDHSDYSSPSSRSSNQGFPRALTSPAHLSGNDDGVYDWLQDNGFVCDETSSQSSMNSRKCSHVNYVDSCMEEGYDEIASSSDTHLCCTQEAKKYTRFCPAEETRANQNHDQRLNSWQHGCCNQHPKRTRRRSYVDIRSQLLHRSLMQEINQRRMFKTVGAVENIGFQEPA* 598
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Pte4g01258 597 FunFam probable serine/threonine-protein kinase WNK9 113 293 - -
Pte4g01258 597 FunFam Probable serine/threonine-protein kinase WNK1 14 111 - -
Pte4g01258 597 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 16 575 - -
Pte4g01258 597 ProSitePatterns Serine/Threonine protein kinases active-site signature. 154 166 IPR008271 GO:0004672|GO:0006468
Pte4g01258 597 Pfam Protein kinase domain 34 287 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte4g01258 597 ProSiteProfiles Protein kinase domain profile. 30 288 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte4g01258 597 Gene3D Transferase(Phosphotransferase) domain 1 113 293 - -
Pte4g01258 597 Gene3D Phosphorylase Kinase; domain 1 13 111 - -
Pte4g01258 597 MobiDBLite consensus disorder prediction 430 453 - -
Pte4g01258 597 SUPERFAMILY Protein kinase-like (PK-like) 33 328 IPR011009 -
Pte4g01258 597 MobiDBLite consensus disorder prediction 434 449 - -
Pte4g01258 597 CDD STKc_WNK 29 288 - -
Pte4g01258 597 SMART serkin_6 30 288 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Pte4g01258 Pte-Chr4 43465555 43468743 Dispersed/Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte4g01258 12 429 MAP Kinase Kinase Kinase AT3G51630 65.877 0.0 577
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Pte4g01258 Pkinase 3.1e-47 CL0016
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte4g01258 K08867 - qsa:O6P43_016490 767.303
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte4g01258 4 43465555 43468743 Pte4g01258 4 43465555 43468743 RCT