Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte4g01257 ATGGTGGGCAATTACAAGCTCAAGTTATCAGATATGATTCCCAGTGCTTGGCTTTTTAAATTTGTGCATATGAGCAAAGGGAGAAGAAGCCTAGCTAACAGTAACACCAACCATTCCAGAAAGGGAATAAGAAAAGCTTCATCAGCTTCAACACAGCCACAGCCATCCAAAACAAAACAACCCCATCAATCAAATCCCAGGGAATCTTACTACTTCACTAGGAAGCTTATCCCAGGTGATGAAAAACCCAAAGTCTCACAGTCAGACTGCTATACTACGTATGTGACTCCGTCTCCAACAAAGTCATCCCAACAAAGATTAAGGAGACCAAGTACTATTACGCCTCCTTCAACCACTAATCTCGCCGGCTCCTCCGTTTCTCCGGGGTGTAACTGTAGGGTCAAACTTGAATCTGTCTGGACCCAATCTGAGTCTCCTTTTGAATACTCGTCGTATCCTTTGGATGCTTGTCCAGAAATCAGAACAGATCGCCTTCTTCCAACAGAATCGTCTGATGAGATGTTTTCATGGTGTAGCTCATGCGGGTACGGAGTCAGTTCCGGTGCCCGTGATATTGTCATGGATGTGGACCGTAACTCTTTAGATGTGCAGTGCGACAAGCTTGATGATTATGACAAATTGTCAGAGCTAGAACTGCCTCCAATTGTAACCAAGCCTGCTAAGTTCAGTGACATGGTGATCGATATGAAGAAGGAGACAAAAACAAAAACTAACAGTAGCCGCTCTGTCAATTATGAAGAAACCAGAAAGCAAAGGTGTCTAAGAGTTAAGATTGCGAAAGAAGAGATGACTTCAATCAAAGAGCAGAGGGATATCGCTGGTAGGAGATTGTCGGTAAGCTCTCCAGGAGTGAGACTCAGAACGAAATCTCCAAAAATATCAAACAGCAAAGTTCAAGCACTAATGAGCAGGAAGCGAGTGTTATCAAGTACAAGAAGAAACAGAAGCCTCTCAGATAGCTATGCAGTGGTGAAGTCATCGTCTGATCCAGAAAGAGACTTCAGGGATTCAATGGTGGAGATGATTGTGGAGAATAAAATCAGGGGGTCAAAAGATTTGGAAGACCTTCTCGCATGTTATCTTTCACTGAATTCAGATGAGTATCACGACCTCATTGTGAAGGTGTTCAAGCAATTATGGTTTGATTTAGTTGACACCAGATAG 1185 0.4312 MVGNYKLKLSDMIPSAWLFKFVHMSKGRRSLANSNTNHSRKGIRKASSASTQPQPSKTKQPHQSNPRESYYFTRKLIPGDEKPKVSQSDCYTTYVTPSPTKSSQQRLRRPSTITPPSTTNLAGSSVSPGCNCRVKLESVWTQSESPFEYSSYPLDACPEIRTDRLLPTESSDEMFSWCSSCGYGVSSGARDIVMDVDRNSLDVQCDKLDDYDKLSELELPPIVTKPAKFSDMVIDMKKETKTKTNSSRSVNYEETRKQRCLRVKIAKEEMTSIKEQRDIAGRRLSVSSPGVRLRTKSPKISNSKVQALMSRKRVLSSTRRNRSLSDSYAVVKSSSDPERDFRDSMVEMIVENKIRGSKDLEDLLACYLSLNSDEYHDLIVKVFKQLWFDLVDTR* 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte4g01257 394 NCBIfam uncharacterized plant-specific domain TIGR01568 329 391 IPR006458 -
Pte4g01257 394 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 237 391 IPR038933 GO:0045892
Pte4g01257 394 MobiDBLite consensus disorder prediction 30 70 - -
Pte4g01257 394 Pfam DNA-binding domain 3 41 IPR025830 GO:0003677
Pte4g01257 394 Pfam Transcriptional repressor, ovate 334 390 IPR006458 -
Pte4g01257 394 MobiDBLite consensus disorder prediction 86 124 - -
Pte4g01257 394 ProSiteProfiles OVATE domain profile. 330 389 IPR006458 -
Pte4g01257 394 MobiDBLite consensus disorder prediction 30 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte4g01257 Pte-Chr4 43457566 43458750 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Pte4g01257 Ovate 1.5e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte4g01257 - - qsa:O6P43_016492 361.303