Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte4g01255 ATGGAGCAGAAAGGGAGTGTGCTGATGCAGCAATATGAATTGGGGAGATTGTTGGGCCAGGGAACGTTCGCCAAGGTTTACTTTGCAAGGAATCTTAAAACTGGAACGAGTGTGGCCATTAAGGTAATTGATAAAGAGAAGATCTTGAAAGTTGGGATGATTGATCAGATTAAGCGAGAAATTTCAGTGATGAGGCTGGTTCGACATCCAAACATAGTTGAGCTTTATGAGGTCATGGCCAGTAAAACCAAGATTTACTTTGTCATGGAGTATGTTAAGGGGGGTGAGTTGTTCAGCAAGGTGGCAAAAGGGAAGCTTAAGGAGGACGTGGCTAGGAAATATTTTCAGCAACTGATAAGTGCTGTTGATTTCTGTCACAGCAGAGGTGTGTGCCACAGGGATCTAAAACCGGAAAATCTGTTATTGGATGAAAATGGGAACTTGAAAGTTACAGATTTTGGACTGAGTACACTTGCAGAATCTAAGCACCAAGATGGCTTGCTCCATACGACATGTGGCACACCTGCGTATGTTGCTCCTGAAGTGATCAACCGAAAGGGTTACGATGGCGCCAAAGCTGATATTTGGTCATGTGGAGTGATCTTATATGTTCTATTGGCTGGGTATCTACCATTCCGCGATGCAAACCTAATGGAGATGTACAAAAAAATTGGAAAAGGAGAGTTCAAATTCCCTAACTGGTTTGCACCTGATGTTCGCAGGCTGTTATCAAAGATATTGGATCCAAACCCAAAGAGCCGGGTGTCAATATCCCAAATTATGGAAAATCCATGGTTTCGAAAGGGATTGAACATCCATTGTGTCTGTAAAGCGATAGAATACAAGGAGCCAGCCCCACTTGATGCTGATGGAGTTTTTGGACCCTGTGAAAATGACAGTTCAATCACAGAGCTAAAGCAAGATATCTCAAAACCATGTAACTTAAATGCTTTCGATATCATCTCCTATTCGACAGGTTTTGATCTGTCTGGCTTGTTTGAAGACACTAATTGCAAGAGAGAAGTGCGGTTTACATCCAATAAACCAGCCTCGATTATTGTCTTGAAGCTGGAAGACATTGCCAAACGTCTTGGCTTGAAAATCCAAAAGAAAGATAGAGGTGTGTTGAAACTGGAAGGTTCCAAGGAAGGTAGGAAGGGGGTATTGGGAATGGATGCTGAAATTTTTGAGATTACCCCAGTGTTCCATCTGGTAGAGGTGAAGAAGTCCAACGGTGATACATTGGAGTATGAGAAGATTATGAAACAGGAACTAAGACCAGCACTCAAGGACATTGTCTGGAACTGGCAAGGAGAGGAGCCTCAACCACTTCACCAGCAAGAAGAATAA 1350 0.4281 MEQKGSVLMQQYELGRLLGQGTFAKVYFARNLKTGTSVAIKVIDKEKILKVGMIDQIKREISVMRLVRHPNIVELYEVMASKTKIYFVMEYVKGGELFSKVAKGKLKEDVARKYFQQLISAVDFCHSRGVCHRDLKPENLLLDENGNLKVTDFGLSTLAESKHQDGLLHTTCGTPAYVAPEVINRKGYDGAKADIWSCGVILYVLLAGYLPFRDANLMEMYKKIGKGEFKFPNWFAPDVRRLLSKILDPNPKSRVSISQIMENPWFRKGLNIHCVCKAIEYKEPAPLDADGVFGPCENDSSITELKQDISKPCNLNAFDIISYSTGFDLSGLFEDTNCKREVRFTSNKPASIIVLKLEDIAKRLGLKIQKKDRGVLKLEGSKEGRKGVLGMDAEIFEITPVFHLVEVKKSNGDTLEYEKIMKQELRPALKDIVWNWQGEEPQPLHQQEE* 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte4g01255 449 FunFam Non-specific serine/threonine protein kinase 310 434 - -
Pte4g01255 449 FunFam Non-specific serine/threonine protein kinase 3 91 - -
Pte4g01255 449 CDD STKc_SnRK3 11 265 - -
Pte4g01255 449 FunFam Non-specific serine/threonine protein kinase 2 294 - -
Pte4g01255 449 ProSiteProfiles NAF domain profile. 310 334 IPR018451 GO:0007165
Pte4g01255 449 Gene3D Kinase associated domain 1, KA1 310 435 - -
Pte4g01255 449 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 6 431 - -
Pte4g01255 449 SUPERFAMILY Protein kinase-like (PK-like) 8 281 IPR011009 -
Pte4g01255 449 CDD CIPK_C 316 430 - -
Pte4g01255 449 ProSiteProfiles Protein kinase domain profile. 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte4g01255 449 SMART serkin_6 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte4g01255 449 ProSitePatterns Protein kinases ATP-binding region signature. 18 41 IPR017441 GO:0005524
Pte4g01255 449 Gene3D Transferase(Phosphotransferase) domain 1 3 306 - -
Pte4g01255 449 Pfam Protein kinase domain 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte4g01255 449 ProSitePatterns Serine/Threonine protein kinases active-site signature. 130 142 IPR008271 GO:0004672|GO:0006468
Pte4g01255 449 Pfam NAF domain 312 370 IPR004041 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte4g01255 Pte-Chr4 43432375 43435289 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte4g01255 1 442 CBL-interacting serine-threonine protein kinases AT5G58380 66.813 0.0 628
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Pte4g01255 Pkinase 3.3e-78 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte4g01255 K07198 - mnt:21404787 729.554