Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte4g01253 ATGGCATCCAGAAAGCAAAAGAAAGCAGCTCTTCAAGAGAAGCTGCAATTACTTCGTTCTGTCGCCAATTCTACCGCTGCTAATAAAGCCTCGATCATTGTGGATGCATCCCAGTATATAGAGGACTTGAAGCAAAAAGTGAAAGGGACGAACCCTGAGAATGAGATGCCCACTTCACAAGCTTCCTCCTCTGATCAAAACCCAGTGGTAAGGGTAGAAACCTTAGAAAGAGGTTTCCTCGTAAATGTGTTCTCTGAAAAAAATTGTCCAGGCATGCTTGTCTCAATTCTCGAAGCTTTTGAAGAGCTTGGACTTGATGTGCTTGATGCTAGGGTTTCTTGCTCAGAAACTTTCCAGCTTGAAGCGGTGGGAGGAGAAAGTCAACAGATTGAGAGCATCGACGCTCAAGTGGTGGAACAAACAGTGTGGCAAGCGATAAATAAGACGGAGTAG 453 0.4481 MASRKQKKAALQEKLQLLRSVANSTAANKASIIVDASQYIEDLKQKVKGTNPENEMPTSQASSSDQNPVVRVETLERGFLVNVFSEKNCPGMLVSILEAFEELGLDVLDARVSCSETFQLEAVGGESQQIESIDAQVVEQTVWQAINKTE* 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte4g01253 150 MobiDBLite consensus disorder prediction 45 68 - -
Pte4g01253 150 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 1 146 - -
Pte4g01253 150 MobiDBLite consensus disorder prediction 51 68 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte4g01253 Pte-Chr4 43423142 43424922 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte4g01253 1 126 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G26744 28.125 1.43e-09 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte4g01253 - - ccaj:109816195 197.978
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte4g01253 4 43423142 43424922 Pte4g01253 4 43423142 43424922 RCT
Pte4g01253 4 43423142 43424922 Pte16g00932 16 28791037 28798772 RCT
Pte4g01253 4 43423142 43424922 Pte8g00796 8 31382570 31385320 RCT