Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pte4g01234 | ATGAGTGAAATGGAATCTGAAGAGGAGGTTCATGATCAGCCCATCGAAGGAGATGATGGTTCTCTGGTGAGACATACAGGATCTTCAAACTTCGTATCAACTTATTGCCAAAGAGGAACTAAAGGTGTCAATCAAGATGCCTTGACTGTATGGGAGGGCTTTACTGGTGAGAAAGACACGGTGTTCTGCGGTGTGTTTGATGGTCATGGTCCTTCCGTTCACAAGGTCTCGCGATTTGTGCGTGACCACTTGCCGGTAAGTATCTCAGAAGCAATCAAAGCATCAGAGCTTAAAGGTAGCAACATGTCACAAGCTTCTTGGGAAGGCAGCTTTGTCAAATCTTTCAAGGAGATGAAGACCTCGCCCAGGACTAATAGACCCTACTGCAGTGGTTCCACCGTTGTAGCAGTTGTAAAGCAGGGTGACAATTTGATAATTGGCAACTTGGGAGATTCTCGTGCAGTCCTTTGCACAAGAGAAAACAAAGAGCTTGTTCCTGTCCAACTTACAGTTGACCTGAAGTCAAACGTTCCAAGTGAAGCTGAAAGGATACTCAGTGGCGAGGGCAGAGTATTTGCAGAAGAAGAACCAGATGTGTACAGAATATGGATGCCAGATGAAGATATTCCTGGACTAGCTATGGCAAGATCATTTGGTGGCTTCTGCCTCAAAGACTATGGCGTAATCTCGACCCCTATAGACCCCTGA | 708 | 0.459 | MSEMESEEEVHDQPIEGDDGSLVRHTGSSNFVSTYCQRGTKGVNQDALTVWEGFTGEKDTVFCGVFDGHGPSVHKVSRFVRDHLPVSISEAIKASELKGSNMSQASWEGSFVKSFKEMKTSPRTNRPYCSGSTVVAVVKQGDNLIIGNLGDSRAVLCTRENKELVPVQLTVDLKSNVPSEAERILSGEGRVFAEEEPDVYRIWMPDEDIPGLAMARSFGGFCLKDYGVISTPIDP* | 236 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pte4g01234 | 235 | SMART | PP2C_4 | 22 | 229 | IPR001932 | - | |
| Pte4g01234 | 235 | SUPERFAMILY | PP2C-like | 28 | 232 | IPR036457 | - | |
| Pte4g01234 | 235 | CDD | PP2Cc | 30 | 232 | IPR001932 | - | |
| Pte4g01234 | 235 | ProSiteProfiles | PPM-type phosphatase domain profile. | 31 | 235 | IPR001932 | - | |
| Pte4g01234 | 235 | MobiDBLite | consensus disorder prediction | 1 | 23 | - | - | |
| Pte4g01234 | 235 | Gene3D | - | 23 | 233 | IPR036457 | - | |
| Pte4g01234 | 235 | PANTHER | PROTEIN PHOSPHATASE | 27 | 232 | IPR015655 | GO:0004722|GO:0006470 | |
| Pte4g01234 | 235 | Pfam | Protein phosphatase 2C | 55 | 230 | IPR001932 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Pte4g01234 | Pte-Chr4 | 43283496 | 43284831 | Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Pte4g01234 | 5 | 232 | PP2C-type Phosphatase Gene Family | AT5G01700 | 52.675 | 1.71e-78 | 239 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Pte4g01234 | - | - | vun:114185420 | 285.804 |