Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte4g01233 ATGAACGATGAATTTGTTGTTTTGGCAACTGATGGGGTTTGGGATGTGTTGACAAACAGCGAAGTGGTAGACATAGTTGCATCAGTAAGAAGACCATCCATGGCAGCTAAGATACTAGTTAAACATGCTGTTAAGGCTTGGAAATATAAATATCCCAAATCGCTGATTGATGATATTGCAGTTGTTTGCTTGTTCCTGAAAAACCACCCAACCTTAATGAGTTGCAGTTCAAGGAAATTACACTTTGATCAAGCGAAGCACCTTCACTATATATGTGATGCTTGCATGCTGCCTTCTCGGTTTAGTACTTTCACATATTTACGTGAACACATTAATAGAATGCCAGCTAGTCCTCATTATCCAAACACCAGCCACATCCCTGTATGGTCCTGA 393 0.402 MNDEFVVLATDGVWDVLTNSEVVDIVASVRRPSMAAKILVKHAVKAWKYKYPKSLIDDIAVVCLFLKNHPTLMSCSSRKLHFDQAKHLHYICDACMLPSRFSTFTYLREHINRMPASPHYPNTSHIPVWS* 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte4g01233 130 Gene3D - 1 71 IPR036457 -
Pte4g01233 130 Pfam Protein phosphatase 2C 2 45 IPR001932 -
Pte4g01233 130 ProSiteProfiles PPM-type phosphatase domain profile. 1 66 IPR001932 -
Pte4g01233 130 PANTHER PROTEIN PHOSPHATASE 2 64 IPR015655 GO:0004722|GO:0006470
Pte4g01233 130 SUPERFAMILY PP2C-like 2 69 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte4g01233 Pte-Chr4 43282734 43283474 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte4g01233 3 77 PP2C-type Phosphatase Gene Family AT1G79630 54.667 1.45e-22 90.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte4g01233 - - qsu:112035292 110.923
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte4g01233 4 43282734 43283474 Pte4g01233 4 43282734 43283474 RCT