Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte4g01230 ATGGGAAGTAGGAATCACCATAATAGAAATTTCGTTAGAAATCAATCTCACAAGAACTTTCACTTTCCTTTACTCCAGTTGCATGATAGATATGTCATTTGGGGTTTGCTTTTTTTTCAAGTTTTTGTTTTCACTTGTCACCTTGCTTCTGCCCTCAAATGGGATGGGATCATTGTTACACAAGCAGATTACCAAGCTCTCCGAGATTTTAAAAATAATATAATTGACCCTACTGGAGTTCTGAGAAGCTGGAACGATAGTGGATATGGAGCTTGTTCAGGTAAGTGGGTAGGAATCAAATGTGTCAAGGGTCAGGTCATTGCTATCCAACTTCCATGGAAGGGATTGGGTGGTAGGATATCAGAGAAGATTGGCCAACTTCAAGCACTTAGGAAGCTCAGTCTTCATGACAATGTTCTTACTGGTACTGTCCCTTGGTCACTTGGGTTCCTCCCTAATCTCAGAGGGGTTTATCTATTCAACAATAGGCTTTCAGGTACTATACCTACTTCCATTGGTAACTGTCTCATGCTTCAGACTTTTGATGTAAGCAATAATATGATACGTGGTACCATTCCTCCTAGCCTAGCAAACTCAACCAGGTTATACAGGTTGAACATGAGCTTCAACTCTCTTTCGGGTTCTATTCCTAACAGTTTCACACAGTCTCCTTCATTAGCTATACTTGCTATTCAACACAACAATATCTCTGGTTCTATTCCAAATACTTGGGGCGAAGTGGGAAACAGAACTTTCCAGCTTCAGATATTGACCCTTGATCATAACCTTATTTCTGGCACTATTCCAACTTCTTTAGGAAGCTTGCTTTTGCTTGAAGAGGTTTCTCTAAGCCATAACCAGATTTCAGGGCCTATACCTAATGAATTAGGCCCGCTTTCGAGGCTTAGACTACTCGATCTATCAAACAATGCCATCAATGGAAGCTTTCCTGGTAGCTTTACAAATCTATCCTCTCTCGTTTCCTTGAGCCTTGAGAGGAATAGCTTAACCAGCCATATCCCAGATAGTATAGACAGGCTCTTCAACCTTTCTGTGCTCAACCTAAAGAACAATAAACTCGATGGAGAAATCCCAGAAACTATTGGAAACATATCAGGCATCAACCAAATTGATTTATCTGGAAATGGTTTTGTGGGAACCATTCCTGATTCACTTACCAAGCTTGCAAACCTCAGTTCTTTCAATGTTTCTTACAACAATCTGTCTGGTCCCGTTCCCTCTCTGCTTGCGAGAAAGTTCAGTCCAAGCTCGTTTGTTGGTAATCTCCAACTTTGTGGTTTCGGTCCTTCAAACACATGTCCGTCTCCTCCACCTCAGAAACCTCCAGCTCCATCATTTGAGACTTTAAAATCACATCACCGCAGGTTTAGTACCAAGGATATAATCCTTGTAGCAGCTGGCGCTCTCCTTGTAATCCTACTTGTAATTTGCTTTATTTTGTTATGCTGTTTGATTACAAGAAAGGCAACTTCAAAAGAAAAGAACAGTAAATCTGCTGAAGCAGCAGAAGCAACTGAGAAGACAGCTCCTGCAGGTACTGAAGTTCAAGCAGGAGGTGAAGCTGGTGGGAAACTGGTTCACTTTGATGGACCATTTGTGTTTACAGCTGATGATCTTTTGTGTGCCACAGCTGAGATAATGGGGAAGAGTGCATATGGAACAGCATACAAGGCAACATTGGAGGATGGAAATCAAATAGCAGTGAAAAGGTTGAGAGAAAAAACTACAAAGGGGCGGAAGGAGTTTGAATCAGAGGTTGCTGCCCTTGGGAAAATCAGACATCCAGATCTCTTGGCACTTAGAGCATACTATTTGGGACCCAAAGGAGAGAAGCTACTTGTATTTGATTACATGTGTAAAGGAAGTCTTTCTTCTTTTCTTCACGCTCGGGGTCCAGAAATTGTCATTGATTGGCGAACAAGGATGAAGATAGTAATGGGGATCACACGTGGTCTGATCTTCCTCCATACAAAAAATATTGTACATGGGAATCTCACATCTAGAAATATACTCTTGGATGAGGAGAACAATGCTCATATTGCAGATTATGGTCTTTCCCGGCTAATGACAAGTTCTTCAAATACCAATATAATTGCTACAGCGGGAACTTTGGGTTACAATGCACCTGAACTCTCAAAGACCAAGAACCCAAACATCAAGACTGATGCATACAGCCTTGGCGTGATAATTTTGGAACTCTTAACTGGTAAATCTCCGGGAGAGCCAACAAATGGCATGGATTTGCCACAGTGGGTGGCATCCATAGTGAAAGAGGAGTGGACGAATGAGGTTTTCGATTTGGAACTCATGAGAGATTCACAAAACTTGGGGGATGAGTTGCTAAACACTTTGAAGTTAGCTTTGCATTGTGTTGATCCCTCCCCTGCTTCAAGGCCAGAAGTTCAGCAGGTTCTCCAGCAACTGGAGGAGATCAAGCCAGATTTGGCTGCGACTTCAGAGGGGGGTGATGGAATCAAAGTCCCACCACCAACTGAATAA 2520 0.4218 MGSRNHHNRNFVRNQSHKNFHFPLLQLHDRYVIWGLLFFQVFVFTCHLASALKWDGIIVTQADYQALRDFKNNIIDPTGVLRSWNDSGYGACSGKWVGIKCVKGQVIAIQLPWKGLGGRISEKIGQLQALRKLSLHDNVLTGTVPWSLGFLPNLRGVYLFNNRLSGTIPTSIGNCLMLQTFDVSNNMIRGTIPPSLANSTRLYRLNMSFNSLSGSIPNSFTQSPSLAILAIQHNNISGSIPNTWGEVGNRTFQLQILTLDHNLISGTIPTSLGSLLLLEEVSLSHNQISGPIPNELGPLSRLRLLDLSNNAINGSFPGSFTNLSSLVSLSLERNSLTSHIPDSIDRLFNLSVLNLKNNKLDGEIPETIGNISGINQIDLSGNGFVGTIPDSLTKLANLSSFNVSYNNLSGPVPSLLARKFSPSSFVGNLQLCGFGPSNTCPSPPPQKPPAPSFETLKSHHRRFSTKDIILVAAGALLVILLVICFILLCCLITRKATSKEKNSKSAEAAEATEKTAPAGTEVQAGGEAGGKLVHFDGPFVFTADDLLCATAEIMGKSAYGTAYKATLEDGNQIAVKRLREKTTKGRKEFESEVAALGKIRHPDLLALRAYYLGPKGEKLLVFDYMCKGSLSSFLHARGPEIVIDWRTRMKIVMGITRGLIFLHTKNIVHGNLTSRNILLDEENNAHIADYGLSRLMTSSSNTNIIATAGTLGYNAPELSKTKNPNIKTDAYSLGVIILELLTGKSPGEPTNGMDLPQWVASIVKEEWTNEVFDLELMRDSQNLGDELLNTLKLALHCVDPSPASRPEVQQVLQQLEEIKPDLAATSEGGDGIKVPPPTE* 840
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte4g01230 839 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 208 818 - -
Pte4g01230 839 Pfam Leucine rich repeat 302 360 IPR001611 GO:0005515
Pte4g01230 839 Gene3D Transferase(Phosphotransferase) domain 1 626 828 - -
Pte4g01230 839 SUPERFAMILY Protein kinase-like (PK-like) 552 820 IPR011009 -
Pte4g01230 839 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 60 222 - -
Pte4g01230 839 Pfam Leucine rich repeat N-terminal domain 62 101 IPR013210 -
Pte4g01230 839 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 245 443 - -
Pte4g01230 839 Pfam Protein tyrosine and serine/threonine kinase 552 815 IPR001245 GO:0004672|GO:0006468
Pte4g01230 839 ProSiteProfiles Protein kinase domain profile. 548 822 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte4g01230 839 FunFam Leucine-rich repeat receptor-like protein kinase 533 624 - -
Pte4g01230 839 MobiDBLite consensus disorder prediction 501 523 - -
Pte4g01230 839 MobiDBLite consensus disorder prediction 819 839 - -
Pte4g01230 839 SUPERFAMILY L domain-like 100 428 - -
Pte4g01230 839 Gene3D Phosphorylase Kinase; domain 1 554 625 - -
Pte4g01230 839 Gene3D Ribonuclease Inhibitor 254 443 IPR032675 -
Pte4g01230 839 SMART LRR_typ_2 347 371 IPR003591 -
Pte4g01230 839 SMART LRR_typ_2 151 175 IPR003591 -
Pte4g01230 839 SMART LRR_typ_2 299 322 IPR003591 -
Pte4g01230 839 SMART LRR_typ_2 127 150 IPR003591 -
Pte4g01230 839 SMART LRR_typ_2 323 346 IPR003591 -
Pte4g01230 839 SMART LRR_typ_2 395 418 IPR003591 -
Pte4g01230 839 FunFam Pollen receptor-like kinase 1 625 828 - -
Pte4g01230 839 Gene3D Ribonuclease Inhibitor 59 253 IPR032675 -
Pte4g01230 839 CDD STKc_IRAK 554 818 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte4g01230 Pte-Chr4 43262882 43266701 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte4g01230 54 820 Receptor kinase-like Gene Family AT3G51740 68.605 0.0 1020
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Pte4g01230 PK_Tyr_Ser-Thr 1.7e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte4g01230 - - qsa:O6P43_026290 1172.53