Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte4g01210 ATGGCTAGTGGAGCCAGAGGTAGCAATACAACAGAAACATTCGAAATATTTTTCCTTGGGTGGTTGTCAAGGCAAGAGCAGTACCTTGCTTTACTTATTGCAGCTCAACAACACATTCATGAAGAACATGAGCTCAGGGTATTGATATCTCGTGTCCTGCAACATTACCAACAATACTATGAACAAAAATCAAAGATTGCGCAACATAACGTCTTGTTATGTTTCTCCCCAACATGGATGTCCTCTTTTGAGCGTGCTTTCCTCTGGATAGGTGGGTTCAAGCCAGGTTTGGCATTTAAGATTTTAGCTAAAGTTTTGCGTGATTTGTCAGAAGAGCAAATTAGCAGGATTGGGAGATTGGTTCAAGAGATTAAGGTTGAAGAGCGAGCACTCAACGAGGAGTTTGCAAAGGTTCAAGAAAGCGTGGCAGCGCCACCTTTGATTGAAAAAGTGAAGCGCCATGGTGGAGTGAGACTCGTCGACGGTGAGATACCAGAAGAGCATGACGCGATGGACACTCTCAAAGCTGGATTGGAGAATGTTCTAACTAACGCAGATTTGCTTAGGACATTCACGGCTACGAAGCTGATTGAGATACTTAGGCCTCAACAAACTGTGAAGTTTTTGGCGGCTGCTGCTCGATTACATATTAAAATTAGAGCGTGGGGTATGGAGAAAGATAGTAGATGGTAG 693 0.4358 MASGARGSNTTETFEIFFLGWLSRQEQYLALLIAAQQHIHEEHELRVLISRVLQHYQQYYEQKSKIAQHNVLLCFSPTWMSSFERAFLWIGGFKPGLAFKILAKVLRDLSEEQISRIGRLVQEIKVEERALNEEFAKVQESVAAPPLIEKVKRHGGVRLVDGEIPEEHDAMDTLKAGLENVLTNADLLRTFTATKLIEILRPQQTVKFLAAAARLHIKIRAWGMEKDSRW* 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte4g01210 230 Coils Coil 121 141 - -
Pte4g01210 230 ProSiteProfiles DOG1 domain profile. 11 229 IPR025422 GO:0006351|GO:0043565
Pte4g01210 230 PANTHER DOG1 DOMAIN-CONTAINING PROTEIN 13 228 - -
Pte4g01210 230 Pfam Seed dormancy control 31 103 IPR025422 GO:0006351|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte4g01210 Pte-Chr4 43028473 43030672 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte4g01210 4 221 Calmodulin-binding Proteins AT1G77920 30.942 5.72e-22 90.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte4g01210 - - qsa:O6P43_026241 258.07