Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte4g01206 ATGGGGCCTCGAAGTTTTTCATGGGATGTTACTAAGAAATTCTTCACAATTGGGATTATATCATTGACTGTGAGTGATCGATATTTCAGTGTTGTGCCAGTGCGTGGTGGTTCTATGTCTCCCACTTTTAATCCTAAGACCAGATCTTTTGGGGGCTCTATCTCTGATGACTACGTTTTGGTTGAGAAATTGTGCCTTGAAAAGTATAAATTTGCGCATGGAGATGTGGTTGTATTTCGGTCCCCATTGAATTACAAGGAGAAACACATAAAGAGGATAACTGCATTACCAGGTGAATGGTTTGGTTCTGGTCATTCATTTGATGTTGTCAAGATACCGGATGGACATTGTTGGGTTGAGGGAGATAACACAGCTTCAAGCATGGATTCCAGATCTTTCGGTCCAATTCCTCTAGGTCTAGTTCAGGGAAGAGTGACACACATTGTCTGGCCTCCTCAAAGAATGGGTGCAGTTGAGAGAAAGCCTCCTGCTCAAATATATCCCGCGTACTAG 513 0.4288 MGPRSFSWDVTKKFFTIGIISLTVSDRYFSVVPVRGGSMSPTFNPKTRSFGGSISDDYVLVEKLCLEKYKFAHGDVVVFRSPLNYKEKHIKRITALPGEWFGSGHSFDVVKIPDGHCWVEGDNTASSMDSRSFGPIPLGLVQGRVTHIVWPPQRMGAVERKPPAQIYPAY* 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte4g01206 170 SUPERFAMILY LexA/Signal peptidase 29 158 IPR036286 -
Pte4g01206 170 PRINTS Bacterial leader peptidase 1 (S26A) family signature 89 101 IPR000223 GO:0006508|GO:0008236|GO:0016020
Pte4g01206 170 PRINTS Bacterial leader peptidase 1 (S26A) family signature 27 43 IPR000223 GO:0006508|GO:0008236|GO:0016020
Pte4g01206 170 PRINTS Bacterial leader peptidase 1 (S26A) family signature 112 131 IPR000223 GO:0006508|GO:0008236|GO:0016020
Pte4g01206 170 PANTHER MITOCHONDRIAL INNER MEMBRANE PROTEASE SUBUNIT 2 1 164 IPR037730 GO:0006465|GO:0006627|GO:0008236|GO:0042720
Pte4g01206 170 CDD S26_SPase_I 30 145 IPR019533 GO:0004252|GO:0006465
Pte4g01206 170 Gene3D Umud Fragment, subunit A 25 161 - -
Pte4g01206 170 Pfam Signal peptidase, peptidase S26 110 150 IPR019533 GO:0004252|GO:0006465
Pte4g01206 170 Pfam Signal peptidase, peptidase S26 9 99 IPR019533 GO:0004252|GO:0006465
Pte4g01206 170 FunFam Mitochondrial inner membrane protease subunit 25 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte4g01206 Pte-Chr4 42995000 42999795 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte4g01206 39 162 MADS-box Gene Family AT1G29960 35.385 7.39e-20 78.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte4g01206 K09648 - qsa:O6P43_016615 284.648