Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte4g01205 ATGGCCGCGTCCACAGCTGCAGCTGCTGCATCCTCTTTCATCGGAACCCGTCTCCCAAATTCAAGCTCAGGTCGGGTACAAGCAAGGTCCGGATCAGGTCGGGTGGAAGCAAGGTTCGGATTCGGTACCAAGAAGCGTGCTCCTTCAAAGAAAGGACCCAAACCCAGTTCAGATCGTCCACTGTGGTATCCAGGAGCCACCGCACCGGAATGGTTGGACGGAAGCTTGGTGGGTGACTACGGATTCGACCCATTTGGGTTGGGGAAACCCGCAGAGTATTTGCAGTTTGACTACGACGGGTTGGACCAGAACCTGGCGAAGAACGTGGCAGGAGATATTATCGGTACCCGAACTGAGGTATCAGATGTAAAGTCAACTCCTTTCCAGCCATACAGTGAGGTATTTGGATTGCAGAGATTTAGAGAGTGTGAACTCATCCATGGAAGATGGGCTATGTTGGCTACTCTTGGAGCTCTTACTGTGGAGTGGCTCACTGGTGTTACATGGCAAGACGCTGGAAAGGTAGAGCTTGTGGAAGGTTCATCCTACCTTGGGCAGCCACTTCCATTTTCAATCAGCACACTGATATGGATTGAAGTTTTGGTGATTGGGTACATTGAGTTTCAGAGGAATGCTGAGCTTGACCCTGAGAAGAGACTTTACCCAGGTGGGAAGTTCTTTGATCCTCTTGGCTTAGCAGCAGACCCAGAGAAGAAAGCAACTCTTCAGTTGGCAGAAATCAAACATGCCCGTCTAGCGATGGTTGCATTTCTTGGCTTTGCAGTCCAAGCTGCAGCCACTGGTAAAGGTCCCCTTAACAACTGGGCTACTCATTTGAGCGATCCTCTCCACACTACCATCATTGACACATTCACTTCCTAA 882 0.5023 MAASTAAAAASSFIGTRLPNSSSGRVQARSGSGRVEARFGFGTKKRAPSKKGPKPSSDRPLWYPGATAPEWLDGSLVGDYGFDPFGLGKPAEYLQFDYDGLDQNLAKNVAGDIIGTRTEVSDVKSTPFQPYSEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSISTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLAADPEKKATLQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTFTS* 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte4g01205 293 Gene3D Chlorophyll a/b binding protein domain 62 293 - -
Pte4g01205 293 MobiDBLite consensus disorder prediction 15 29 - -
Pte4g01205 293 Pfam Chlorophyll A-B binding protein 68 264 IPR022796 -
Pte4g01205 293 FunFam Chlorophyll a-b binding protein, chloroplastic 111 293 - -
Pte4g01205 293 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 2 292 IPR001344 GO:0009765|GO:0016020
Pte4g01205 293 MobiDBLite consensus disorder prediction 15 62 - -
Pte4g01205 293 SUPERFAMILY Chlorophyll a-b binding protein 55 292 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte4g01205 Pte-Chr4 42991512 42992944 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte4g01205 1 293 Chloroplast and Mitochondria Gene Families AT3G08940 83.276 2.43e-172 476
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte4g01205 K08915 - sind:105174728 520.005