Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte4g01196 ATGGGCGTGGATTACTACAAAATCCTTCAGGTAGACAAGAACGCCAAAGATGATGACCTCAAGAAAGCTTATCGTAAACTTGCTATGAAGTGGCACCCTGACAAAAACCCCAATAATAAGAAAGATGCTGAAGCCAAATTCAAGCAAATCTCCGAAGCTTACGATGTTCTAAGTGATCCCCAGAAGAGAGCAGTTTATGATCAGTTTGGCGAGGAGGGTTTGAAAAGCGGTGCGCCTTCCCCAGGTGCTGGGGGATTTTCAGCTGGACCTGAAGCTGGATACACAACATTTCAGTTCAATCCCAGGAGCGCCGATGATATATTCTCAGAATTTTTTGGGTTTTCCCGCCCGTTTGGAGGGATGGGTGGAATGGGTGATATGGGTGGTGGTCGTGCTGGTGGTCCATTTGCTAGGGGAGGTATGTTTGGTGATGATATATTTGCTTCATTCAGGAGTGGTGCTGGGGAGGCCTCAAGCAATATGCCCAGAAAAGGCGCTCCAATAGAGCGAACATTGTTATGTAGTTTGGAGGATTTGCATAAAGGAACCACCAAGAAGATGAAAATTTCAAGGGATGTTGCCGATGCCAGTGGGTAA 597 0.4657 MGVDYYKILQVDKNAKDDDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKRAVYDQFGEEGLKSGAPSPGAGGFSAGPEAGYTTFQFNPRSADDIFSEFFGFSRPFGGMGGMGDMGGGRAGGPFARGGMFGDDIFASFRSGAGEASSNMPRKGAPIERTLLCSLEDLHKGTTKKMKISRDVADASG* 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte4g01196 198 SUPERFAMILY Chaperone J-domain 3 124 IPR036869 -
Pte4g01196 198 FunFam DnaJ subfamily B member 13 3 122 - -
Pte4g01196 198 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 1 197 - -
Pte4g01196 198 CDD DnaJ 4 59 IPR001623 -
Pte4g01196 198 Gene3D DnaJ domain 3 122 IPR036869 -
Pte4g01196 198 Pfam DnaJ domain 4 67 IPR001623 -
Pte4g01196 198 Gene3D - 156 197 - -
Pte4g01196 198 SMART dnaj_3 3 62 IPR001623 -
Pte4g01196 198 PRINTS DnaJ domain signature 6 24 IPR001623 -
Pte4g01196 198 PRINTS DnaJ domain signature 42 62 IPR001623 -
Pte4g01196 198 PRINTS DnaJ domain signature 24 39 IPR001623 -
Pte4g01196 198 PRINTS DnaJ domain signature 62 81 IPR001623 -
Pte4g01196 198 ProSiteProfiles dnaJ domain profile. 4 70 IPR001623 -
Pte4g01196 198 ProSitePatterns Nt-dnaJ domain signature. 47 66 IPR018253 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte4g01196 Pte-Chr4 42932940 42933810 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte4g01196 5 67 C2H2 Transcription Factor Family AT1G74250 38.806 2.33e-10 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte4g01196 K09510 - twl:119992172 291.967