Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte4g01194 ATGGGAAATTGTTGCAGATCTCCGGCGGCAGTTGCTCGAGAAGACGTGAAACCGAGCTTCTCAGCTTCTGGAATTTTAGGAGAAAGGTTCTCAGAAATTGTTGGAAGTCCATATTATATGGCTCCAGAGGTTCTCAAGAGAAATTACGGCCCAGAAATTGATATCTGGAGTGCTGGAGTCATACTATACATTTTATTGAGCGGGGTTCCTCCATTTTGGGCTGAATCTGAACAAGGAGTTGCACAGGCGATACTTCGAGGCATCGTTGATTTCAAACGTTTCCCTTGGCCCAGTATTTCCGATGGTGCAAAGAGTCTTGTCAGGCAAATGCTGGAACCAGATCCCAAGCTTAGGCTGACTGCAAAGCAGGTGCTTGAGCATCCATGGCTGCAAAATGCTAAAAAAGCCCCAAATGTTCCTCTTGGTGATGTTGTCAAATCAAGGCTTAAGCAGTTTTCAATGATGAACAGATTTAAGAGAAAAGCCTTGAGGGTGGTTGGTGATTTCTTATCTGTTGAAGAAGTAGGAGACATTAAGGAAATGTTTGAAAAGATGGATAGTGATAACGATGGTGTCATCTCTACAGATGAACTAAAAGCTGGATTCCGGAATTTTGCTCCCCAACTAGCGGAGTCAGAAGTTCAAATCCTCATTGAAGCTGTCGATAACGGGAAGGGAACTCTAGACTATGGAGAATTCGTTGCTATTTCACTCCATTTAAAACGGGTTGCTAACGATGAACATCTTCACAAGGCTTTCTCTTACTTTGACAAAGATGGCAATGGCTACATTGAACACGAGGAACTGCGGGAAGCCTTGATGGAAGATGGAGCAGACGATTTTGCAGCTGTGGCAAATGATATATTCCAGGAAGTTGACACAGACAAGGATGGGCGTATCAGCTATGATGAATTTGTAGCAATGATGAAAACTGGAACAGATTGGAGAAAGGCCTCTCGACATTACTCAAGAGGCAGATTCAACAGCCTAAGCTTGAAGCTACTGAAAGATGGTTCTCTGAACTCGGGGGCCGATCAGAATCTGTAG 1047 0.4394 MGNCCRSPAAVAREDVKPSFSASGILGERFSEIVGSPYYMAPEVLKRNYGPEIDIWSAGVILYILLSGVPPFWAESEQGVAQAILRGIVDFKRFPWPSISDGAKSLVRQMLEPDPKLRLTAKQVLEHPWLQNAKKAPNVPLGDVVKSRLKQFSMMNRFKRKALRVVGDFLSVEEVGDIKEMFEKMDSDNDGVISTDELKAGFRNFAPQLAESEVQILIEAVDNGKGTLDYGEFVAISLHLKRVANDEHLHKAFSYFDKDGNGYIEHEELREALMEDGADDFAAVANDIFQEVDTDKDGRISYDEFVAMMKTGTDWRKASRHYSRGRFNSLSLKLLKDGSLNSGADQNL* 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte4g01194 348 ProSiteProfiles Protein kinase domain profile. 1 130 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte4g01194 348 SUPERFAMILY EF-hand 155 322 IPR011992 -
Pte4g01194 348 Pfam Protein kinase domain 29 130 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte4g01194 348 ProSiteProfiles EF-hand calcium-binding domain profile. 280 315 IPR002048 GO:0005509
Pte4g01194 348 SMART serkin_6 4 130 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte4g01194 348 Pfam EF hand 177 204 IPR002048 GO:0005509
Pte4g01194 348 FunFam Calcium-dependent protein kinase 7 139 313 - -
Pte4g01194 348 PANTHER SERINE/THREONINE-PROTEIN KINASE 28 305 - -
Pte4g01194 348 ProSitePatterns EF-hand calcium-binding domain. 186 198 IPR018247 -
Pte4g01194 348 Pfam EF-hand domain pair 247 310 IPR002048 GO:0005509
Pte4g01194 348 FunFam Calcium-dependent protein kinase 7 75 137 - -
Pte4g01194 348 SUPERFAMILY Protein kinase-like (PK-like) 28 155 IPR011009 -
Pte4g01194 348 SMART efh_1 248 276 IPR002048 GO:0005509
Pte4g01194 348 SMART efh_1 177 205 IPR002048 GO:0005509
Pte4g01194 348 SMART efh_1 213 240 IPR002048 GO:0005509
Pte4g01194 348 SMART efh_1 284 312 IPR002048 GO:0005509
Pte4g01194 348 Gene3D Transferase(Phosphotransferase) domain 1 14 137 - -
Pte4g01194 348 Gene3D - 138 313 - -
Pte4g01194 348 ProSiteProfiles EF-hand calcium-binding domain profile. 173 208 IPR002048 GO:0005509
Pte4g01194 348 ProSitePatterns EF-hand calcium-binding domain. 257 269 IPR018247 -
Pte4g01194 348 ProSiteProfiles EF-hand calcium-binding domain profile. 244 279 IPR002048 GO:0005509
Pte4g01194 348 ProSitePatterns EF-hand calcium-binding domain. 293 305 IPR018247 -
Pte4g01194 348 CDD EFh 248 310 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte4g01194 Pte-Chr4 42922984 42927685 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte4g01194 27 341 EF-hand Containing Proteins AT1G74740 69.620 7.28e-164 467
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Pte4g01194 Pkinase 2.4e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte4g01194 K13412 - qsa:O6P43_026234 570.466