Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte4g01193 ATGGAAGGACATGGACAACATCCTCTACAACAACAATTTCAGCAGCATCGGCATCAACAACATCAGCAACAACAATATCAGCATAACATTAGCGTTAACGTTGACGTGAGTGATAGGTTCCCCCAATGGAGTATCCAAGAAAGTAAGGAGTTCTTGATGATAAGAGCAGAGCTGGACCAGACTTTCATGGAAACAAAACGCAACAAGCTTCTATGGGAAGTCATAGCCACGAAAATGAAAGAAAAAGGTTATAATCGAAGTGCAGAGCAGTGCAAGTGCAAGTGGAAAAACCTTGTTACACGCTACAAGGGATGCGAAACGATGGAGCCAGAAACCACGAGACAACAATTCCCTTTTTACAATGACATACAAGCGATTTTTGCTGCCAGGATGCAGAAAATGCTGTGGGCTGAAGCCGAAGGAGGTGGAGCCAGTGGGTCCAAGAAGGCGGCGGAGGCGGTGCAGCTCTCATCAGATGAGGAAAGTTATAATGAAGATAGTGAAGGAGAGAGAGGCAGTGGGATACGTGGTAGGAAGAAGAAAAAGGGCAAGAGAACTAGTAATGTAGTTGGTGGTGGAAGTGGTCGTCGTAACAGTTTGAAGGAGATATTGCAAGAGTTTATGAAGCAACAGATACAAATGGAAGCAAAGTGGATGGAAGCTTTTGAGGCAAGAGAGAATGAGAGAAGAATGAAGGAGATGGAGTGGAGGCAAAGAATGGAGGCGTTGGAGAATGAGAGGTTGATGATGGACCAGAGATGGAGGGAAAGGGAAGAGCAAAGAAAAATGAGAGAAGAAGCTAGGGCTGAGAAAAGAGATGTTTTAATCACAGTTCTCTTGAACAAGATGAGAAGAGAGGAATAA 864 0.4433 MEGHGQHPLQQQFQQHRHQQHQQQQYQHNISVNVDVSDRFPQWSIQESKEFLMIRAELDQTFMETKRNKLLWEVIATKMKEKGYNRSAEQCKCKWKNLVTRYKGCETMEPETTRQQFPFYNDIQAIFAARMQKMLWAEAEGGGASGSKKAAEAVQLSSDEESYNEDSEGERGSGIRGRKKKKGKRTSNVVGGGSGRRNSLKEILQEFMKQQIQMEAKWMEAFEARENERRMKEMEWRQRMEALENERLMMDQRWREREEQRKMREEARAEKRDVLITVLLNKMRREE* 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte4g01193 287 Pfam Myb/SANT-like DNA-binding domain 42 126 IPR044822 -
Pte4g01193 287 Gene3D - 43 104 - -
Pte4g01193 287 CDD GT1 41 106 - -
Pte4g01193 287 ProSiteProfiles Myb-like domain profile. 43 99 IPR001005 -
Pte4g01193 287 MobiDBLite consensus disorder prediction 1 25 - -
Pte4g01193 287 MobiDBLite consensus disorder prediction 140 196 - -
Pte4g01193 287 MobiDBLite consensus disorder prediction 7 25 - -
Pte4g01193 287 PANTHER FI21293P1 15 284 - -
Pte4g01193 287 FunFam Zinc finger and SCAN domain-containing 20 43 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte4g01193 Pte-Chr4 42915017 42916767 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte4g01193 1 286 Trihelix Transcription Factor Family AT2G38250 50.166 1.16e-72 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Pte4g01193 Myb_DNA-bind_4 2.2e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte4g01193 - - pvy:116115135 357.066
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte4g01193 4 42915017 42916767 Pte4g01193 4 42915017 42916767 RCT