Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte4g01184 ATGCCTTCAGCTTATACCGTCATTGTGTCCAAATGCACAGTCTATCCTGAGAAAAAATCTCCGATCAGAACTCTCAGACTCTCCGTATCTGACCTGCCTATGCTTTCATGTCATTACATTCAGAAAGGGGTCTTACTCCCTTCCCCTCCTTCTTCCTTTGATGATCTTCTCGTCTCTCTTAAGCACTCGCTTTCTGTCACACTTGCCCATTTCCCAGCCCTCGCTGGCCGTTTCATGACAGACTCCTGTGGCTATGTTCACATCAACTGCAACGATGCTGGTGTTGATTTCATCCACGCAGAAGCTAAACAACTTTCCATTCAAAACATATTTGGCGCCCCCACTGGTACTGACATACCCAGTTGCTTCAGGGAATTCTTTGCTTTTGACAAAACTATAAGCTATTTGGGCCATTTTCAACCTCTGGTGGCAGTTCAGGTCACCGAGCTTGGTGATGGCGTTTTCATTGGTTGCACAGTCAATCACGCCGTGACAGATGGAACATCCTTCTGGCATTTCTTCAACACTTTCGCTGAAATCTGCAAAGGAGTCAACAAGATTTCCATGTCTCCTAATTTCACGCGCGACACTGTGTTTGACTCTATAGCGGTGCTCAAGCTACCTGCCGGCGGTCCTAAGGTGACCTTTTCTGCTGAGGAACCGTTGAGAGAGAGAATCTTCCACTTCAGCAGAGAATCAATCATGAGACTGAAAAAGAGAGCGAATGGAATCGAAGTTTTAACGCAGAAAGCAACAAATAACGGTTTTCCGAATTTCTCAGAGATCCACGGGAAACTAGAGAATGACAGTTGGAAGACGGTCCATAATGATAACGGTAAAATAACTAACTTGCTGAGAAACGAAATGCCAATCAAGAAGACAACGGAGATCTCGTCGTTTCAATCCCTCTGCGCTCAGTTATGGAGGTCGGTTACTCGTGCAAGGAACTTGGATCCATCCAAAACGTCCACGTTTCGTATGGCGGTGAACTGCCGTCACCGTCTCGAGCCACCGATGGACACTTACTACTTCGGCAATGCAATTCAGAGCATTCCAACCTATGCAGAAGTCAGCGAAATCCTCTGTCAGGATCTCAGTTGGTGTGCTGAGCGGCTGCACAAGAACGTGGTAGCTCACGACGACGTTACGGTACGGCGTGGCATAGCAAGCTGGGAGGAACAGCCAAGGTTGTTTCCGCTGGGGAATGCCGACGGAGCGTCCATCACAATGGGAAGTTCACCGAGGTTTCCCATGTACAATAACGATTTCGGGTGGGGGCGGCCTTTGGCTGTCAGAAGTGGCGGCGCTAACAAATTTGACGGCAAGATTTCGGCGTTTCCAGGGAGGGAAGGTAATGGGAGCGTGGATCTTGAAGTCGTTTTAGCGCCTGAAACGATGGCGGGACTTGAAAACGACATGGAGTTTATGCAATATGTCACGTCAAGTTAA 1449 0.4817 MPSAYTVIVSKCTVYPEKKSPIRTLRLSVSDLPMLSCHYIQKGVLLPSPPSSFDDLLVSLKHSLSVTLAHFPALAGRFMTDSCGYVHINCNDAGVDFIHAEAKQLSIQNIFGAPTGTDIPSCFREFFAFDKTISYLGHFQPLVAVQVTELGDGVFIGCTVNHAVTDGTSFWHFFNTFAEICKGVNKISMSPNFTRDTVFDSIAVLKLPAGGPKVTFSAEEPLRERIFHFSRESIMRLKKRANGIEVLTQKATNNGFPNFSEIHGKLENDSWKTVHNDNGKITNLLRNEMPIKKTTEISSFQSLCAQLWRSVTRARNLDPSKTSTFRMAVNCRHRLEPPMDTYYFGNAIQSIPTYAEVSEILCQDLSWCAERLHKNVVAHDDVTVRRGIASWEEQPRLFPLGNADGASITMGSSPRFPMYNNDFGWGRPLAVRSGGANKFDGKISAFPGREGNGSVDLEVVLAPETMAGLENDMEFMQYVTSS* 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte4g01184 482 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 8 477 - -
Pte4g01184 482 Gene3D - 210 472 IPR023213 -
Pte4g01184 482 Gene3D - 6 206 IPR023213 -
Pte4g01184 482 Pfam Transferase family 8 476 - -
Pte4g01184 482 SUPERFAMILY CoA-dependent acyltransferases 60 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte4g01184 Pte-Chr4 42797780 42799881 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte4g01184 8 471 Monolignol Biosynthesis Gene Families AT5G48930 25.934 1.56e-34 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte4g01184 - - qsa:O6P43_016644 740.725