Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte4g01182 ATGATAGTTGCTATGGACTTAAATGCCTTGCCGGAAGATGATGATGAGACTTTTGAGCGGCACATAGAAGAATACACCGAACCAGAAGAACGCGTCGAGAGTGCTGTAGATATTGCCAGACGGGAGCGTGAAGAAAGAAAAAGGCGACTAAAACGAGATCGTCCTGATGACAGGCCAGTGCATGTCTCTCAAGCTACCGCTTATGAACCTCTCTTTCCATCAAAGTGTCTTAAACCTAATGACAAAAACAGGATTCCACCAGGCTGGTTGGATTGTCCTTCATTTGGTCAGGAAATATGTTGCATGGTACCGTCCAAGGTTCCGCTATCTGAATTCTACAATGACTATATTCCTCCTGGTAAACGATACTCATTCAAACAAGTGATTCACCAACAAAGGGTCTTAGGAAGAAAGCTTGGTTTAGTGATTGATCTTACGAATACATCCCGTTACTATAATGTCGCTGATTTAAAGAAAGAGGGTATCAAGCACGTCAAGATTCAATGCAGGGGGCGTGATTCTGTGCCTGATAACTTATCTGTAAATCAGTTTGTCTATGAGGTTATACAATTCCTGTCACGTCAGAAACAGTCCAAAAAATACATACTTGTGCACTGTACACACGGACACAATCGGACAGGATATATGATTATCCATTATCTGATGCGCTCTATGTCACTTTCTGTTACTCAGGCAATAAAAATATTTGCCGATGCACGGCCACCTGGAATCTACAAACCTGATTATATTGGTGCCTTGTATGCTTTCTATCACGAAAAGCAGCCTGAAATGGTTGTTTGTCCATCTATTCCAGAATGGAAGAGATCTTCAGATCTTGATCTCAATGGTGAAGCTGTACCAGATGACGACGACGACGGACTTCCAGAAGTTCCTTTACAGGAAAATCATGATGCAAATGGCATAATGACCAACGATGATGTTTTAGGAGATGAAATACCTAGCGATCAGCAAGACGCATTTCGGCAGTTCTGCTATCAAGCACTTAAATTGAATGTCGGAGGAAGAGGGCACATGCAATTTCCAGGATCGCATCCAGTTTCTCTTAACAGAGAAAATTTACAGCTGTTAAGGCAGCGTTACTATTATGCAACCTGGAAAGCTGATGGAACGCGTTACATGATGCTGATAACCATGGATGGGTGTTACATAATTGATAGAAGTTTCAATTTTCGGAGGGTCCAAATGAGGTTCCCTTGCAGGGCAGATGTTTCAGCTGAGAAGTATCAGTCTCATCACTTTACTTTACTAGATGGGGAGATGATCATTGATACATTGCCAGACTCACAAAAGCAAGAGAGGCGTTATCTTATATATGATATGATCGCAATCAACCATGTTTCCATCATAGAGCGGCCTTTCTGTGAACGTTGGAAGTTGCTTGAGAAAGAAGTTATTGAACCCAGGAATCAGGAGCGCCATAATAGGAATTTATATTATAGATATGACATGGAACCATTTAGGGTGAGGAGGAAGGACTTTTGGTTGCTCAGTGCTGTTATAAAGCTTTTGAGAGAATTTATTCCGAGGCTTTCGCATGCTGCAGATGGTCTAATATTTCAGGGATGGGATGATCCATATGTACCGAGGACGCACGAGGGCCTTTTAAAGTGGAAATATGCCGATATGAACTCAGTTGACTTTCTCTTTGAGATAAGTGAAGATGGCCAGCATCAACTTCTGTTGCATGAAAGGGGGAAGAAAAAACTCATGGAAGGGAACAGAGTTGCATTCAGAGATGGATCAGATCCCGAGTATTATTCTGGAAAAATTATCGAGTGCTCTTGGGATTCTGAAGAACAGGAATGGGTTTGCATGCGCATCAGGACAGATAAATCTACTCCAAATGAATTCAATACTTATAAGAAGGTGTTACGGAGCATAAGGGACAATATAACGGAGGAGGTTTTGTTGAATGAGATTAATGAGATAATACGCCTCCCCATGTATGCTGATAGGATTGAGAAAGAAAGCAAACCACGGCGAAGGTGA 2010 0.4184 MIVAMDLNALPEDDDETFERHIEEYTEPEERVESAVDIARREREERKRRLKRDRPDDRPVHVSQATAYEPLFPSKCLKPNDKNRIPPGWLDCPSFGQEICCMVPSKVPLSEFYNDYIPPGKRYSFKQVIHQQRVLGRKLGLVIDLTNTSRYYNVADLKKEGIKHVKIQCRGRDSVPDNLSVNQFVYEVIQFLSRQKQSKKYILVHCTHGHNRTGYMIIHYLMRSMSLSVTQAIKIFADARPPGIYKPDYIGALYAFYHEKQPEMVVCPSIPEWKRSSDLDLNGEAVPDDDDDGLPEVPLQENHDANGIMTNDDVLGDEIPSDQQDAFRQFCYQALKLNVGGRGHMQFPGSHPVSLNRENLQLLRQRYYYATWKADGTRYMMLITMDGCYIIDRSFNFRRVQMRFPCRADVSAEKYQSHHFTLLDGEMIIDTLPDSQKQERRYLIYDMIAINHVSIIERPFCERWKLLEKEVIEPRNQERHNRNLYYRYDMEPFRVRRKDFWLLSAVIKLLREFIPRLSHAADGLIFQGWDDPYVPRTHEGLLKWKYADMNSVDFLFEISEDGQHQLLLHERGKKKLMEGNRVAFRDGSDPEYYSGKIIECSWDSEEQEWVCMRIRTDKSTPNEFNTYKKVLRSIRDNITEEVLLNEINEIIRLPMYADRIEKESKPRRR* 670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte4g01182 669 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 182 251 IPR000387 GO:0016311|GO:0016791
Pte4g01182 669 FunFam mRNA capping enzyme family protein 544 653 - -
Pte4g01182 669 Gene3D DNA ligase/mRNA capping enzyme 310 543 - -
Pte4g01182 669 Pfam mRNA capping enzyme, catalytic domain 351 545 IPR001339 GO:0004484|GO:0005524|GO:0006370
Pte4g01182 669 CDD Adenylation_mRNA_capping 322 546 IPR001339 GO:0004484|GO:0005524|GO:0006370
Pte4g01182 669 CDD RNA_5'-triphosphatase 88 254 - -
Pte4g01182 669 Pfam Dual specificity phosphatase, catalytic domain 137 257 IPR000340 GO:0008138|GO:0016311
Pte4g01182 669 ProSiteProfiles Dual specificity protein phosphatase domain profile. 112 263 IPR020422 GO:0006470|GO:0008138
Pte4g01182 669 MobiDBLite consensus disorder prediction 26 60 - -
Pte4g01182 669 Pfam mRNA capping enzyme, C-terminal domain 549 644 IPR013846 -
Pte4g01182 669 ProSitePatterns Tyrosine specific protein phosphatases active site. 204 214 IPR016130 GO:0016311|GO:0016791
Pte4g01182 669 PANTHER MRNA-CAPPING ENZYME 80 658 - -
Pte4g01182 669 Gene3D - 544 653 IPR012340 -
Pte4g01182 669 FunFam mRNA capping enzyme, putative 310 543 - -
Pte4g01182 669 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 84 272 IPR029021 -
Pte4g01182 669 PIRSF mRNA_capping_HCE 74 669 IPR017074 GO:0004484|GO:0006370|GO:0140818
Pte4g01182 669 SMART dsp_5 98 259 IPR020422 GO:0006470|GO:0008138
Pte4g01182 669 SUPERFAMILY Nucleic acid-binding proteins 548 660 IPR012340 -
Pte4g01182 669 FunFam mRNA capping enzyme family protein 81 295 - -
Pte4g01182 669 SUPERFAMILY DNA ligase/mRNA capping enzyme, catalytic domain 311 546 - -
Pte4g01182 669 Gene3D Protein tyrosine phosphatase superfamily 64 280 IPR029021 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte4g01182 Pte-Chr4 42772092 42780304 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte4g01182 1 669 Protein tyrosine phosphatase (PTP) family AT3G09100 69.970 0.0 946
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte4g01182 K13917 - qsa:O6P43_016658 1096.65