Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte4g01176 ATGCCAGAATCTGAGGTGGAAACCCCGACGGCACAGTCGGCTCCGGCGACTCCAGGGACTCCAGGTGGTCCACTGTTCACATCTCTACATGTGGATTCCATGTCTTATGATCGCAAGTCAATGCCACGATGCAAGTGTTTACCGGCGTTTGATGCTTCAGCTTGGGGCCAGCCTCACACTTGCTTCACTCACATGTCAGTTTCCGATGTGTCCCTCACTCGAAAGTTAGGTGCAGAGTTTGTGGGAACTTTCATCTTGATATTTGGAGCCACGGCAGCACCTATTGTGAACGAAAAGTATAACGGAGCAGAGACACTGATTGGCAATGCAGCTTGTGCTGGACTGGCTGTGATGATAGTAATTCTTTCTACTGGACATATTTCTGGAGCACATCTCAACCCATCACTAACAATTGCATTTGCAGCTTTACGCCACTTCCCATGGATTCAAGTTCCATCATACATAGCAACACAAGTTGCAGCATCCATATGTGCTTCTTTTGCACTTAAGGGTGTTTTCCATCCTTTCATGTCGGGTGGCGTTACAATTCCTTCCGTGAGTCTCGGCCAAGCTTTTGCACTAGAGTTCGTGATTACTTTCATTCTAGTATTTGTTGTCACTGCTGTGGCCACTGATACAAGAGCGGTTGGAGAATTGGCTGGCATTGCTGTTGGAGCCACTGTCATGCTTAACATTCTAGTTGCAGGGCCATCAAGTGGAGGTTCAATGAATCCTGTTCGTACCTTGGGACCAGCTATTGCAGCAGGAAACTACAAAGCACTATGGGTGTATCTAGTGGCACCAACATTTGGAGCACTTGCTGGAGCTGGTACTTATACTTTGGTCAAGTTACACGAGACTGGCGCTGAAGCACCGCGACAAGTGAGGAGCTTCCGTCGCTAG 903 0.4828 MPESEVETPTAQSAPATPGTPGGPLFTSLHVDSMSYDRKSMPRCKCLPAFDASAWGQPHTCFTHMSVSDVSLTRKLGAEFVGTFILIFGATAAPIVNEKYNGAETLIGNAACAGLAVMIVILSTGHISGAHLNPSLTIAFAALRHFPWIQVPSYIATQVAASICASFALKGVFHPFMSGGVTIPSVSLGQAFALEFVITFILVFVVTAVATDTRAVGELAGIAVGATVMLNILVAGPSSGGSMNPVRTLGPAIAAGNYKALWVYLVAPTFGALAGAGTYTLVKLHETGAEAPRQVRSFRR* 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte4g01176 300 PRINTS Major intrinsic protein family signature 113 137 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pte4g01176 300 PRINTS Major intrinsic protein family signature 262 282 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pte4g01176 300 PRINTS Major intrinsic protein family signature 74 93 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pte4g01176 300 PRINTS Major intrinsic protein family signature 150 169 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pte4g01176 300 PRINTS Major intrinsic protein family signature 225 247 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pte4g01176 300 PRINTS Major intrinsic protein family signature 194 212 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pte4g01176 300 Pfam Major intrinsic protein 68 279 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pte4g01176 300 Gene3D Glycerol uptake facilitator protein. 53 295 IPR023271 -
Pte4g01176 300 MobiDBLite consensus disorder prediction 1 17 - -
Pte4g01176 300 SUPERFAMILY Aquaporin-like 67 288 IPR023271 -
Pte4g01176 300 ProSitePatterns MIP family signature. 131 139 IPR022357 -
Pte4g01176 300 PANTHER AQUAPORIN NIP2-1 55 286 IPR034294 -
Pte4g01176 300 MobiDBLite consensus disorder prediction 1 23 - -
Pte4g01176 300 FunFam Aquaporin NIP2-1 62 294 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte4g01176 Pte-Chr4 42731447 42734582 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte4g01176 25 301 Major Intrinsic Protein MIP AT4G10380 81.655 1.49e-162 452
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte4g01176 K09874 - csv:101212651 474.552