Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte4g01166 ATGGTGGAGAAGACTAAGGTCAGAAAGGAAGAGGTGGTTACCAGAGAATACACCATCAACCTTCACAAGCGCTTGCATGGATGTACATTCAAGAAGAAAGCTCCAAATGCAATAAAAGAGATAAGGAAATTTGCTGAAAAAGCCATGGGGACCAAGGATGTTAGAGTGGATGTCAAGCTGAACAAATTTGTTTGGAGCAGAGGTATCAGGAGTGTCCCAAGAAGGATCAGGGTTCGCATTGCTCGCAAGAGGAATGATGATGAGGATGCAAAGGAAGAGCTGTACTCCCTTGTTACTGTCGCAGAAATACCACAAGAAGGACTTGGGGGTTTGGGCACTAAGGTCATTGATGATGATGAATGA 363 0.4435 MVEKTKVRKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAEKAMGTKDVRVDVKLNKFVWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPQEGLGGLGTKVIDDDE* 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte4g01166 120 ProSitePatterns Ribosomal protein L31e signature. 54 68 IPR020052 GO:0003735|GO:0005840|GO:0006412
Pte4g01166 120 FunFam 60S ribosomal protein L31 6 119 - -
Pte4g01166 120 SMART Ribosomal_L31e_2 10 93 IPR000054 GO:0003735|GO:0005840|GO:0006412
Pte4g01166 120 Gene3D - 8 120 IPR023621 -
Pte4g01166 120 PANTHER 60S RIBOSOMAL PROTEIN L31 2 118 IPR000054 GO:0003735|GO:0005840|GO:0006412
Pte4g01166 120 Pfam Ribosomal protein L31e 11 92 IPR000054 GO:0003735|GO:0005840|GO:0006412
Pte4g01166 120 CDD Ribosomal_L31e 9 92 IPR000054 GO:0003735|GO:0005840|GO:0006412
Pte4g01166 120 SUPERFAMILY Ribosomal protein L31e 11 92 IPR023621 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte4g01166 Pte-Chr4 42570552 42572290 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte4g01166 2 121 Cytoplasmic Ribosomal Protein Gene Family AT2G19740 84.167 9.16e-70 203
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte4g01166 K02910 - tcc:18588452 196.052