Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte4g01145 ATGGCCTCAGTAAGGCATCATCATCATGAGCTTGTACCTCTGGCTGCATTAATTAGTAGAGAGATCAAGAATGAGAAGATGGAGAAGCCTACTGTGAATTATGGTCATGCAGCTCAGTCTAAGAAAGGAGAGGATTATTTTCTGATAAAAACTGATTGTCAGCGAGTGTCCGGAAATTCTTCTTCAACATTTTCTGTTTTTGCGATCTTCGATGGGCACAATGGAAATGCTGCTGCCATTTATACCAGGGAGCATTTGTTGAATCATGTGCTAAGTGCAGTGCCAAGGGGCCTGGGAAGGGACGAGTGGCTTCAAGCTCTGCCTCGAGCATTGGTTGCTGGATTTGTGAAGACTGACAAGGAATTCCAAAGTAGAGGAGAAACATCTGGGACAACGGCTACGTTTGTGATTGTTGATAGGTGGACAGTGACAGTTGCATCTGTTGGAGATTCTCGTTGCGTATTAGATGCTCAGGGTGGTGCTGTTACCAGCTTGACAGTTGATCATCGGCTTGAAGAGAACGTTGAAGAGAGGGAACGTGTGACTGCTAGTGGAGGTGAAGTAGGGAGACTTAGCATTGTAGGTGGTGCCGAGATTGGCCCTCTTCGTTGTTGGCCTGGAGGTCTATGCCTTTCAAGGTCTATTGGCGATATGGATGTTGGGGAGTTCATAGTTCCAGTACCACATGTCAAGCAAGTCAAGCTATCAAGTGCAGGTGGAAGGCTTATAATAGCTTCCGATGGTATCTGGGATGCTCTATCCTCAGAAATGGCTGCCAAGTCTTGTAGAGGATTGCCTGCTGAACTGGCTGCGCGTCAGGTTGTGAAGGAGGCATTGATGATACGGGGCTTAAAGGATGACACCACATGCATAGTAGTTGATATAATCCCACCTGCTAACTCAGTAGATCCACCAGTGACACCTAAAAAGCATCACAGGTTGAGAGCATTATTTTCTAGAAAGAAATCGCTTGATTCCACTAGCAAGCTTTCGAAGAAGCTATCAGCTATTGGTATAGTGGAAGAACTATTTGAAGAAGGATCTGCCATGCTCGCTGAAAGACTTGGCAATGATGACACCTATAATCAATCCACATCAGGGCTTTTCGTGTGTGCTGTATGCCAAGTTGATCTTGCTCCAAGTGAGGGCATATCTGTTCATGCTGGTTCCATTTTCTCAACCAGCTCCAAGCCATGGCAAGGGCCTTTCCTTTGCGCGGTTTGCCGTGACAAGAAGGATGCAATGGAAGGAAGGCGTTCTAGTGGAGTGAAAGTAGCTTAG 1281 0.4629 MASVRHHHHELVPLAALISREIKNEKMEKPTVNYGHAAQSKKGEDYFLIKTDCQRVSGNSSSTFSVFAIFDGHNGNAAAIYTREHLLNHVLSAVPRGLGRDEWLQALPRALVAGFVKTDKEFQSRGETSGTTATFVIVDRWTVTVASVGDSRCVLDAQGGAVTSLTVDHRLEENVEERERVTASGGEVGRLSIVGGAEIGPLRCWPGGLCLSRSIGDMDVGEFIVPVPHVKQVKLSSAGGRLIIASDGIWDALSSEMAAKSCRGLPAELAARQVVKEALMIRGLKDDTTCIVVDIIPPANSVDPPVTPKKHHRLRALFSRKKSLDSTSKLSKKLSAIGIVEELFEEGSAMLAERLGNDDTYNQSTSGLFVCAVCQVDLAPSEGISVHAGSIFSTSSKPWQGPFLCAVCRDKKDAMEGRRSSGVKVA* 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte4g01145 426 SMART PP2C_SIG_2 28 295 IPR001932 -
Pte4g01145 426 SMART PP2C_4 25 293 IPR001932 -
Pte4g01145 426 CDD PP2Cc 34 295 IPR001932 -
Pte4g01145 426 ProSiteProfiles PPM-type phosphatase domain profile. 26 295 IPR001932 -
Pte4g01145 426 Gene3D - 31 300 IPR036457 -
Pte4g01145 426 Pfam Protein phosphatase 2C 59 278 IPR001932 -
Pte4g01145 426 SUPERFAMILY PP2C-like 38 295 IPR036457 -
Pte4g01145 426 FunFam probable protein phosphatase 2C 5 33 300 - -
Pte4g01145 426 PANTHER PROTEIN PHOSPHATASE 34 294 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte4g01145 Pte-Chr4 42442072 42445373 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte4g01145 5 425 PP2C-type Phosphatase Gene Family AT1G68410 78.972 0.0 682
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte4g01145 - - pvy:116141693 733.406