Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte4g01121 ATGAAGGACGATGAAGGCAGAGAAGCAGAGTTGGGAGCACGAACGATGAAGGACGAAGAAGCAGAGTTGGCAGGACGCAAAGGATGGAAGTCAACCACCACCGGTCACTTAATCTACAAGCTTGGAGGTATTGACAAGTGTGTGATCGAGAGGTTTGGGAAGGAAGCTGTTGAGATGAACAAGAGGTTATTCAAGTATGTCTGGGTTAGGGACAAGCTCAAGGTTGAGCGTGAGCGCGGTATCACCATTGATATTGCCCTAGGTTCGGGACAAGCTCCTACCCACGTGCCCGACTGTGTCAAAAAGTTCTTCGTCCTTGACAGCATTGTGAGTTACAAAGGTCATTTCTGA 351 0.4872 MKDDEGREAELGARTMKDEEAELAGRKGWKSTTTGHLIYKLGGIDKCVIERFGKEAVEMNKRLFKYVWVRDKLKVERERGITIDIALGSGQAPTHVPDCVKKFFVLDSIVSYKGHF* 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte4g01121 116 MobiDBLite consensus disorder prediction 1 26 - -
Pte4g01121 116 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 30 90 IPR027417 -
Pte4g01121 116 PANTHER TRANSLATION FACTOR 30 88 - -
Pte4g01121 116 Pfam Elongation factor Tu GTP binding domain 30 87 IPR000795 GO:0003924|GO:0005525
Pte4g01121 116 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 71 86 IPR031157 -
Pte4g01121 116 Gene3D - 28 108 IPR027417 -
Pte4g01121 116 MobiDBLite consensus disorder prediction 1 28 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte4g01121 Pte-Chr4 42275041 42277263 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte4g01121 30 87 Eukaryotic Initiation Factors Gene Family AT1G07930 87.931 2.42e-27 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte4g01121 K03231 - csl:COCSUDRAFT_27513 103.219