Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte4g01120 ATGACATTGCAGCACCTCAACAAAGCTTTCTACTACTACTCCGGCATCTCCAACATGCAGATGGATCCACGTCTCCACTCTGCTTACGAAGATTGTCTCGAACTCTTGGACGGTTCAGTCGACGCAATCACCAAGCTCAAGTCTGCGCTTAAGAAATGGAACTCCTTCAGCAGCAGCAGCAAACGCAGCTGCGTCGCGGATGATGAACCCTCTTCTATTTCTACCAAGTCATGCCTCACACCCGTCTATGTAGGTAAGTCACGGAGGCGACACCTCGTAATGCAAGATGTTGTCGGCCACCCTCTATTTAGAGAATTAGTCGAAAGGTCACGTGACTCTGAGGATGATGACACCATCCATATCGCTTGCGAGGTTGTATTGTTCGAGCACTTGTTGTGGATGCTTGAGAATGCTGACCCGCAACCTGAGTCTTCGGACGAGCTTGTTGAGTTTTATGCTTGCTATTGTTCCATTCGGCCATCTCCGAGATGA 492 0.4919 MTLQHLNKAFYYYSGISNMQMDPRLHSAYEDCLELLDGSVDAITKLKSALKKWNSFSSSSKRSCVADDEPSSISTKSCLTPVYVGKSRRRHLVMQDVVGHPLFRELVERSRDSEDDDTIHIACEVVLFEHLLWMLENADPQPESSDELVEFYACYCSIRPSPR* 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte4g01120 163 PANTHER EXPRESSED PROTEIN 21 153 - -
Pte4g01120 163 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 2 60 IPR035513 -
Pte4g01120 163 Gene3D Invertase/pectin methylesterase inhibitor family protein 1 76 IPR035513 -
Pte4g01120 163 Pfam Auxin responsive protein 52 135 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte4g01120 Pte-Chr4 42274353 42274844 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte4g01120 2 50 Carbohydrate Esterase AT5G53370 55.102 9.22e-11 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte4g01120 - - qsu:112019930 153.68