Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte4g01096 ATGGTGATGAATAGAGAGCAAGTGAAACGGGGAAATCAAGAGAAGGGTTCAGATGGTTTTGACATGTTTATTGTTGCAGTCAAATCTTCAAAGCAAATACCGAAGACTGCTCTCGTATGGACGTTGACTCATGTTGCACAACCTGGTGACCACATTACACTACTGGTTGTTGTCCCATCACAAAGCTCAGGTAGAAAAATTTGGGGCTTTCCAATATTTGCTTGGGAATGTACCAGCGGTAACAAGAAATCTCCTACTACGGAGCAGAGGTTCGATATTACAGATTCTTGTTCTAAGATGATCCTTCAGCTTCATCATATTTATGACTCGAATAAGATCGATGTGAAGATAAAAATTGTCTCTGGTTCACCTTGTGGGTCTGTAGCTGCTGAAGCCAAAAGCAGTCAAGCCAATTGGGTTGTATTAGACAAAGAGCTGAGAAATGAGGCGAAACGATGTATGGAAGAACTGCAGTGTAACATTGTGGTTATGAAGCGTTCCCAGCCAAAAGTTCTGCGCTTGAATCTAGTTGGTACATCAAAGAGACATCGTGCCGAACCAGGTCCCTCGCTCCTCGAGCAGAGGGAGATGCCTGAACAACAAATGGAAACGAAAACAGAATCTCCAAATTGCATGAGAGGACCAGCAGTTACCCCATCAAGTAGCCCAGAGTCAGGTACAGAATTCACCGCAACTGAAGCTGGCACGTCGCCATTGTCATGCTCAGAACCAGGAACCTCACCATGTTTCACCTTAGAGACGAATGCTGAGATGAAGAAAGAGGAGGGGATACCGGAAAGTAAGCAGCTCGAAAATACAAATTCAGATAGTGACAATGAAAGCCTACCTGCATCAAGCTTCAGATTCCAGCCATGGATTGCAGAAAAGTTGGGGAGATACGATGATAAGTCATCTCATTTTGGAGATACGATAATGAATTCAAGATGTAGAGCCAAATTGGACTGTAGTGGCAACAACTTAAGAGAGGCAATATCACTATCAAGAAATGCACCCCGTGGAGCTCCACCATTGTGCTCAATATGTCAGCACAGGGCACCTGTGTTCGGAAAACCTCCGAGATGGTTCAGCTATGCTGAGTTGGAGCTTGCCACTGATGGGTTTTCGGAATCGAATTTCTTGGCAGAAGGAGGATTTGGATCTGTTCACAGAGGAGTGTTACCTGATGGACAAGTAGTTGCGGTGAAGCAACATAAATTGGCCAGTTCTCAAGGGGATGTTGAATTTTGCTCAGAAGTTGAAGTTTTAAGTTGTGCTCAGCATAGAAATGTTGTCATGCTGATTGGTTATTGTGCGGAGGAGGGTAGAAGGTTATTAGTTTATGAATATATATGCAATGGTTCATTGGATTCACATCTATATGGAAGAGATCAGGAGCCATTGGAATGGTCTGCACGTCAAAAAATTGCAGTTGGGGCTGCTAGAGGTCTGCGATACCTTCATGAAGAATGTAGAGTCGGTTGCATTGTGCATCGGGACATGCGACCCAACAACATTCTCATCACTCATGATTTTGAGCCATTGGTTGGTGATTTTGGACTTGCGAGATGGCAACCAGATGGAGAAACAGGAGTGGAAACCAGAGTGATCGGAACATTTGGGTATTTGGCCCCAGAATATGCTCAGATTGGCCAAATCACTGAAAAAGCTGATGTTTATTCCTTTGGTGTGGTCTTGGTTGAACTTGTCACTGGTCGGAAAGCAGTGGACCTCAACAGGCCAAAGGGTCAACAGTGTCTTACTGAATGGGTAATACTCGAGAGGATGCATAGTTATAGCTATTTTGTTTCCATTTTGAAGGGTGTAATTCATTTCAACGAATTATATATTTCGAGGAGTCATTCTCGAAGAATTTTTTTTTTATTTTTAAATTTGGTGCTAATTGGTAGTAAATAA 1914 0.431 MVMNREQVKRGNQEKGSDGFDMFIVAVKSSKQIPKTALVWTLTHVAQPGDHITLLVVVPSQSSGRKIWGFPIFAWECTSGNKKSPTTEQRFDITDSCSKMILQLHHIYDSNKIDVKIKIVSGSPCGSVAAEAKSSQANWVVLDKELRNEAKRCMEELQCNIVVMKRSQPKVLRLNLVGTSKRHRAEPGPSLLEQREMPEQQMETKTESPNCMRGPAVTPSSSPESGTEFTATEAGTSPLSCSEPGTSPCFTLETNAEMKKEEGIPESKQLENTNSDSDNESLPASSFRFQPWIAEKLGRYDDKSSHFGDTIMNSRCRAKLDCSGNNLREAISLSRNAPRGAPPLCSICQHRAPVFGKPPRWFSYAELELATDGFSESNFLAEGGFGSVHRGVLPDGQVVAVKQHKLASSQGDVEFCSEVEVLSCAQHRNVVMLIGYCAEEGRRLLVYEYICNGSLDSHLYGRDQEPLEWSARQKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILITHDFEPLVGDFGLARWQPDGETGVETRVIGTFGYLAPEYAQIGQITEKADVYSFGVVLVELVTGRKAVDLNRPKGQQCLTEWVILERMHSYSYFVSILKGVIHFNELYISRSHSRRIFFLFLNLVLIGSK* 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte4g01096 637 Gene3D Transferase(Phosphotransferase) domain 1 450 624 - -
Pte4g01096 637 MobiDBLite consensus disorder prediction 259 284 - -
Pte4g01096 637 MobiDBLite consensus disorder prediction 268 284 - -
Pte4g01096 637 SUPERFAMILY Protein kinase-like (PK-like) 354 592 IPR011009 -
Pte4g01096 637 Pfam Protein tyrosine and serine/threonine kinase 378 573 IPR001245 GO:0004672|GO:0006468
Pte4g01096 637 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 346 449 - -
Pte4g01096 637 PANTHER OS01G0750732 PROTEIN 285 589 - -
Pte4g01096 637 Gene3D HUPs 20 168 IPR014729 -
Pte4g01096 637 FunFam Dual-specific kinase DSK1-like 14 165 - -
Pte4g01096 637 ProSiteProfiles Protein kinase domain profile. 374 637 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte4g01096 637 ProSitePatterns Tyrosine protein kinases specific active-site signature. 495 507 IPR008266 GO:0004672|GO:0006468
Pte4g01096 637 Gene3D Phosphorylase Kinase; domain 1 346 449 - -
Pte4g01096 637 MobiDBLite consensus disorder prediction 203 246 - -
Pte4g01096 637 MobiDBLite consensus disorder prediction 177 246 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte4g01096 Pte-Chr4 42055042 42057925 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte4g01096 355 590 Trihelix Transcription Factor Family AT1G26150 55.085 2.02e-85 279
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Pte4g01096 PK_Tyr_Ser-Thr 1.7e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte4g01096 - - gmx:100783226 894.804