Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte4g01072 ATGGCTAGGGGAAGAATAAGAGGAAAGCTCAAGAGGAGCCACCTTTACACATTTGGTTGCTTTGGGTTAAGTACCGAAGAACAGACAGAACCACATCTGCTTCAAGGGCCAGGCTACTCAAGAGTTGTGTACTGCAACCAGCCTAGTCTCCACACAAGCAGGAATTTGTTCTATTGTAAGAATAATATTTCAACGACAAAATACAATGTGATCACTTTTCTACCCAAGGCACTATTTGAGCAATTTCGGCGTGTTGCTAACATATATTTTCTTCTGGCTGCATGTCTTTCCATTACACCAATTTCTCCATTCAAACCATTGAGCATGATTGCTCCTTTAGCATTTGTTGTCGGGCTTAGTATGATGAAGGAAGCTCTGGAGGATTGGAATAGGTTCCTTCAGGATGTTAAAGTGAACAGAAGGAAAGTATATGTTCATAATGGAAATGGTACGTTTCGGTTAAGGTCATGGCAAAAAATTGAGGTGGGGGATGTGGTCAAAGTAGAAAAGGATCAGTTCTTTCCAGCAGACCTGCTTCTTTTGTCATCAGGTTATGAGGATGGGATTTGCTATGTAGAGACCATGAATTTAGATGGGGAAACAAACTTGAAATTGAAGAGATCTTTGGAGGTCACCTTATCTTTAGATGGTGATGATACTTTGAAGAACTTCTCAGCGGCAATAAAATGTGAAGATCCGAACCCCAATCTTTACACTTTTGTGGGCAACTTTGAGTATGACCATCAGGTTTATCCTCTTGATCCCAATCACATTCTCCTCCGTGATTCTAAGCTCAGAAATACATCCTACATCTATGGGGTGGTGATTTTTACGGGTCATGATAGCAAGGTCATGCAGAACAGCACAAAGTCCCCTTCAAAGCGAAGCACTATAGAAAAGAAGATGGATTATATTATATACTTGCTTTTCACCCTCCTTCTTTTGATATCTGTAATCAGTTCAATAGGATTTGCTATATTGACTAAGTATAAAACTCCAGAGTGGTGGTATTTACAGCCTAAGAAAATAGATCGTCAATATAATCCCGACGAGTCGTCCCTGGCTGGGTTTTACCATCTGATCACTGCTCTCATCCTCTATGGATATTTGATTCCTATCTCTCTTTATGTCTCAATTGAGGTGGTAAAGGTCTTGCAAGCAACCTTCATCAACCAAGACATACAGATGTATGACGAAGAGACCGGGATTCCAGCTCAAGCACGGACGTCAAATCTAAATGAGGAGTTGGGTCAGGTGGACACAATCCTCTCTGACAAGACTGGAACACTAACCTGCAACCAGATGGATTTTTTAAAATGTTCTATTTCTGGTGTGGCATATGGTATGCGTTCTAGTGAAGTTGAAGTAGCAGCAGCAAAACAGATGGCTTGTGATCTTGGGGAGCAGGAAACAGATCTTTCTAATTTTCATATACCCAAAAATAATAAACACAGTTCTGGGAACAATTTTGGAAGAGTGCCTGAAATAGAGCTTGAAACAATTATTACTCCCAAGGGTGATAAGGATTTGAAACTTCCTATAAAAGGTTTTAGTTTTGAGGATAACCGCCTCATGGGTGGCAACTGGTTGAAAGAGAGCAGTGCTGATGTTCTTTTATTGTTTTTCCGGATATTAGCAATTTGCCAAACTGCTATCCCTGAGCTGAATGAAGAGACTGGTGCCTTTACTTATGAAGCAGAATCACCTGATGAGGCCGCTTTTCTTATAGCTGCAAGGGAGTTTGGTTTTGAGTTCTCTAAGCGAACTCAATCGAGTGTTTCTATCCTAGAAAACTACTCACCTTCAGGCCAGCCAGTGGAAAGGAAATACAAAATTCTGAATCTATTGAATTTTACTAGCAAAAGAAAGCGAATGTCAGTAGTTGTACGTGATGAAGAGGGGCAAACTTTTCTCTTTTGCAAAGGCGCTGACAGCATTATCTTTGATCGATTGTCAAAGAATGGAAAAATGTTTCTGGAAGCAACAACTAAACATTTGAATGACTACGGAGAAGCTGGTTTGCGCACACTTGCTATTGCTTACAAAAAACTTGATGAGAAAGACTACTCTTCTTGGAACAATAACTTTCAGAAAGTCAAAACATCTATTGGTTCTGACAGAGATGCAGAACTTGAGCGGTTATCTGATGTGATGGAAAGGGACTTGATTCTTGTTGGTGCTACTGCTGTGGAAGACAAGCTTCAGAAAGGGGTGCCCCAATGCATTGACAAACTTGCACAGGCTGGTCTCAAGATTTGGGTATTGACTGGAGATAAAATGGAAACTGCAATCAATATAGGATTTGCATGCAGTTTGCTTCGTCAAGGAATGAAGCAAATCTGTATAACTTTACCAAATTCAGATGCTCTTCCTGCTGACGGAAAAGAGGTCCTCAAAGAGAACTTGTTGAACCAACTCACAAATGCTACACAAATGGTAAAGCTGGAGAAAGATCCACATGCTGCATTTGCATTAATTGTCGATGGGAAAACTCTAACATATGCTTTGGAAGACGATGTAAAGTATCACTTCTTAGGATTAGCAGTTGATTGTGCATCAGTTATTTGCTGTCGCGTCTCACCCAAGCAGAAGGCGATGGTAACAAGGTTAGTGAAAGAAGGGACTAAGAGGACTACCTTGGCAATTGGTGATGGAGCAAATGATGTTGGGATGATACAAGAAGCTGACGTAGGTGTTGGTATCAGTGGCGTTGAAGGCATGCAGGCTGTCATGGCTAGTGATTTTGCTGTTGCCCAATTTCGCTTTTTGGAGAGGCTATTGGTAGTCCATGGGCATTGGTGCTACAAAAGAATAGCTCAAATGATTTGCTATTTCTTCTACAAGAACATAGCATTTGGCCTCACCCTCTTCTACTTTGAGGCATTTGCTGGCTTTTCTGGGCAATCGGTGTATGATGACTGGTACATGATATTGTTCAACGTTGTTCTTACTTCATTGCCGGTCATTTCACTAGGAGTATTTGAACAAGATGTTCCATCTGAAGTGTGTCTAGAGTTCCCTGCTCTATATCAGCAAGGACCCAAAAACTTGTTCTTTGATTGGTATAGGATATTGGGATGGATGGGCAATGGTCTTTATTCCTCACTCATAATTTTCTTCCTCAACATTATCATCTTCTACAACCAAGCATTCCGTATGGGGGAGCAGATAGCTGACATGGCTGCTGTCGGAACAACTATGTTCACCTGCATCATATGGGCTGTCAACTGCCAGATAGCCCTAACAATGAGCCATTTCACATGGATACAACACTTGTTTGTCTGGGGTAGTATCATCACCTGGTACCTTTTCCTCTTTATCTATGGCATTTTGCCTCCAATGTGGTCCAAGAGTGCATATCAGATCCTTGTTGAAGTTCTCGGTCCTGCACCTTTATATTGGGCAGCCACACTTTTAGTTGCAGTAATATGTAATCTTCCATATCTAGCTCACATTTCCTTCCAAAGATCTATCAATCCCATGGATCATCACATTATCCAGGAGATCAAGTATTACAAGAAAGATATTGAAGATCAACACATGTGGACCAGGGAGCGTTCGAAAGCGAGACAAGAAACAAAGATTGGATTTACAGCGAGAGTGGAAGCAAGAATCAGACACTTGAAAGGAAGATTGCAGAAGAAACAGTCATCCTTGGGTACTCCACATGCATCTTCATAA 3681 0.4116 MARGRIRGKLKRSHLYTFGCFGLSTEEQTEPHLLQGPGYSRVVYCNQPSLHTSRNLFYCKNNISTTKYNVITFLPKALFEQFRRVANIYFLLAACLSITPISPFKPLSMIAPLAFVVGLSMMKEALEDWNRFLQDVKVNRRKVYVHNGNGTFRLRSWQKIEVGDVVKVEKDQFFPADLLLLSSGYEDGICYVETMNLDGETNLKLKRSLEVTLSLDGDDTLKNFSAAIKCEDPNPNLYTFVGNFEYDHQVYPLDPNHILLRDSKLRNTSYIYGVVIFTGHDSKVMQNSTKSPSKRSTIEKKMDYIIYLLFTLLLLISVISSIGFAILTKYKTPEWWYLQPKKIDRQYNPDESSLAGFYHLITALILYGYLIPISLYVSIEVVKVLQATFINQDIQMYDEETGIPAQARTSNLNEELGQVDTILSDKTGTLTCNQMDFLKCSISGVAYGMRSSEVEVAAAKQMACDLGEQETDLSNFHIPKNNKHSSGNNFGRVPEIELETIITPKGDKDLKLPIKGFSFEDNRLMGGNWLKESSADVLLLFFRILAICQTAIPELNEETGAFTYEAESPDEAAFLIAAREFGFEFSKRTQSSVSILENYSPSGQPVERKYKILNLLNFTSKRKRMSVVVRDEEGQTFLFCKGADSIIFDRLSKNGKMFLEATTKHLNDYGEAGLRTLAIAYKKLDEKDYSSWNNNFQKVKTSIGSDRDAELERLSDVMERDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITLPNSDALPADGKEVLKENLLNQLTNATQMVKLEKDPHAAFALIVDGKTLTYALEDDVKYHFLGLAVDCASVICCRVSPKQKAMVTRLVKEGTKRTTLAIGDGANDVGMIQEADVGVGISGVEGMQAVMASDFAVAQFRFLERLLVVHGHWCYKRIAQMICYFFYKNIAFGLTLFYFEAFAGFSGQSVYDDWYMILFNVVLTSLPVISLGVFEQDVPSEVCLEFPALYQQGPKNLFFDWYRILGWMGNGLYSSLIIFFLNIIIFYNQAFRMGEQIADMAAVGTTMFTCIIWAVNCQIALTMSHFTWIQHLFVWGSIITWYLFLFIYGILPPMWSKSAYQILVEVLGPAPLYWAATLLVAVICNLPYLAHISFQRSINPMDHHIIQEIKYYKKDIEDQHMWTRERSKARQETKIGFTARVEARIRHLKGRLQKKQSSLGTPHASS* 1227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte4g01072 1226 SFLD p-type atpase 406 933 IPR044492 -
Pte4g01072 1226 SUPERFAMILY HAD-like 411 926 IPR036412 -
Pte4g01072 1226 Gene3D - 119 290 - -
Pte4g01072 1226 Pfam Phospholipid-translocating ATPase N-terminal 43 110 IPR032631 -
Pte4g01072 1226 FunFam Phospholipid-transporting ATPase 119 289 - -
Pte4g01072 1226 Pfam Cation transport ATPase (P-type) 554 652 - -
Pte4g01072 1226 CDD P-type_ATPase_APLT_Dnf-like 61 1035 - -
Pte4g01072 1226 Gene3D - 420 432 IPR023214 -
Pte4g01072 1226 FunFam Phospholipid-transporting ATPase 725 922 - -
Pte4g01072 1226 NCBIfam HAD-IC family P-type ATPase 854 963 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pte4g01072 1226 NCBIfam phospholipid-translocating P-type ATPase 58 1168 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Pte4g01072 1226 FunFam Phospholipid-transporting ATPase 592 723 - -
Pte4g01072 1226 ProSitePatterns E1-E2 ATPases phosphorylation site. 425 431 IPR018303 -
Pte4g01072 1226 SUPERFAMILY Calcium ATPase, transduction domain A 144 287 IPR008250 -
Pte4g01072 1226 Pfam Phospholipid-translocating P-type ATPase C-terminal 910 1160 IPR032630 -
Pte4g01072 1226 Gene3D - 721 922 IPR023214 -
Pte4g01072 1226 SFLD Haloacid Dehalogenase 406 933 - -
Pte4g01072 1226 PRINTS P-type cation-transporting ATPase superfamily signature 423 437 - -
Pte4g01072 1226 PRINTS P-type cation-transporting ATPase superfamily signature 882 901 - -
Pte4g01072 1226 Gene3D - 565 700 IPR023299 GO:0000166
Pte4g01072 1226 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 35 1179 - -
Pte4g01072 1226 SUPERFAMILY Calcium ATPase, transmembrane domain M 54 1150 IPR023298 -
Pte4g01072 1226 Gene3D - 433 457 IPR023299 GO:0000166
Pte4g01072 1226 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 524 688 IPR023299 GO:0000166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte4g01072 Pte-Chr4 41809903 41815464 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte4g01072 1 1219 Primary Pumps ATPases AT1G17500 74.241 0.0 1916
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte4g01072 K01530 - gmx:100778710 2000.33