Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte4g01062 ATGGTGCACCAGACCTCCAACACGGATTCATCTTCCGATTCTCGCTATTACAACCCATATAAGGACCTCGAAATTCCAATCAGAAACCTTTACCAACTCCCTACATCACCTGAATACCTTTTTGATGAAGAAGCGCAAAGAAAGCGTCGATCTTGGGGTGAGAATCTCACTTTTTACACCGGTTGCGGTTACCTCACCGGAGCGCTTGCTGGTGCGGGATATGGATTAGTGACTGGAGTCAAATCATTCGAACCTGGTGATACCACGAAGCTCCGGATTAATCGGGTGCTGAACTCGTCTGGTCATGCCGGTAGGTCCTGGGGAAACCGATTGGGTGTTATTTGTTTGCTTTATGCCGGTACTGAAAGCGGGATTGCTGCTTTGAGGGATACTGATGACGTATGGAATAGTGTGGCAGCTGGGTTAGGGACTGGTGCTTTGTATCGTGCGGCGAGAGGGGTGAGGTCTGCAGCGGTGGCAGGAGCTGTAGGTGCGGCTGTAGTTGGTATTGGCGTGACAGCGAAGCAAGCAATGAAGCGATATGTGCCCATATGA 555 0.5045 MVHQTSNTDSSSDSRYYNPYKDLEIPIRNLYQLPTSPEYLFDEEAQRKRRSWGENLTFYTGCGYLTGALAGAGYGLVTGVKSFEPGDTTKLRINRVLNSSGHAGRSWGNRLGVICLLYAGTESGIAALRDTDDVWNSVAAGLGTGALYRAARGVRSAAVAGAVGAAVVGIGVTAKQAMKRYVPI* 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte4g01062 184 PANTHER TIM23 23 171 IPR045238 GO:0022857
Pte4g01062 184 Pfam Tim17/Tim22/Tim23/Pmp24 family 58 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte4g01062 Pte-Chr4 41765534 41766541 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte4g01062 6 185 Chloroplast and Mitochondria Gene Families AT1G72750 66.667 2.87e-77 227
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte4g01062 K17794 - gmx:100813158 256.144