Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte4g01056 ATGCAGGAATTGAATTTAAGCGATTTAACTAGCATTACTGAGCAACACTTGATTTTTAAATTTTGTTTTTTTAACATTTATACTTTTTTTTTGTTATCGATCAACTTGCTGTGTGGTAATGAGAATTGGTTCTACTTTCAGATCAAGGACATGGCACTGAAAGCTTCAGGCGCATACAAGAACTGTAAACCCTGTTCAGGGTCATCAAATAACAGTAAGAATAGACATTATGGCGAGTCTGATACAGCATCGAATTCTGCAAGGTTTCACTGCGCTTATCGAAGAACTGGGAGCGCCAACTCTACGCCTAGGATGTGGGGAAAAGAAATGGAAGCAAGGCTGAAAGGTCTTTCCAGTGGGGAGGGAACACCGGCATCGGTGAGTGGACGTACTGAGTCAATTGTCTTAATGGAGGAAGATGAACCAAAGGAATGGGTGGCACAAGTTGAGCCCGGTGTGCTAATCACGTTTGTTTCATTACCTCAAGGAGGAAATGATCTGAAACGCATTCGGTTCAGTCGTGAAATGTTCAATAAATGGCAAGCTCAGAGGTGGTGGACAGAAAACTATGAAAAGATCATGGAATTATACAATGTTCAAAGATTTAATCAACAAGGAGTTCCCATGGCAACTCCGCCTAGATCTGAAGACGAGAGCTCAAAGGTTGAATCTGCTAGAGAAAGTCCAGCCACTCCTCCTCTAAGCAGAGAACGCCTACCCCGTCATGTCCATCGTCCATTGGGAATGGGTTACTCTTCTTCAGATTCACTTGAACACCAGTCTACACAATCCCGTCATTACTGTGATACTAGCGGTCTTGCTTCAACACCTAAACTATCTAGCATTAGTGGAGCAAAGACTGAGGCATCGTCTGGGGTCGGTTCAGTCAGGACTAGTTCATCGCCTGAGGCTGATCACTCAGGTGAGCTTTCTGTCAGCAATGCCAGCGACATGGAGACTGAGTGGGTGGAACAGGATGAACCAGGTGTTTACATCACTATTAGACAACTGACCGGTGGAGCTCGGGAGCTTAGACGCGTTCGATTCAGCCGAGAACGATTTGGAGAAATGCATGCAAGGCTGTGGTGGGAGCAGAATCGTGCAAGGATACAAGAACAATATTTGTGA 1128 0.4477 MQELNLSDLTSITEQHLIFKFCFFNIYTFFLLSINLLCGNENWFYFQIKDMALKASGAYKNCKPCSGSSNNSKNRHYGESDTASNSARFHCAYRRTGSANSTPRMWGKEMEARLKGLSSGEGTPASVSGRTESIVLMEEDEPKEWVAQVEPGVLITFVSLPQGGNDLKRIRFSREMFNKWQAQRWWTENYEKIMELYNVQRFNQQGVPMATPPRSEDESSKVESARESPATPPLSRERLPRHVHRPLGMGYSSSDSLEHQSTQSRHYCDTSGLASTPKLSSISGAKTEASSGVGSVRTSSSPEADHSGELSVSNASDMETEWVEQDEPGVYITIRQLTGGARELRRVRFSRERFGEMHARLWWEQNRARIQEQYL* 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte4g01056 375 MobiDBLite consensus disorder prediction 207 316 - -
Pte4g01056 375 Pfam Transcription factor BRX N-terminal domain 47 65 IPR027988 -
Pte4g01056 375 Pfam Transcription factor regulating root and shoot growth via Pin3 319 374 IPR013591 -
Pte4g01056 375 Pfam Transcription factor regulating root and shoot growth via Pin3 143 197 IPR013591 -
Pte4g01056 375 ProSiteProfiles BRX domain profile. 320 375 IPR013591 -
Pte4g01056 375 PANTHER PROTEIN BREVIS RADIX-LIKE 1 47 375 IPR044532 -
Pte4g01056 375 MobiDBLite consensus disorder prediction 253 316 - -
Pte4g01056 375 ProSiteProfiles BRX domain profile. 143 198 IPR013591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte4g01056 Pte-Chr4 41718243 41722404 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte4g01056 46 376 Major Intrinsic Protein MIP AT1G31880 49.284 1.68e-94 285
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte4g01056 - - cave:132186704 575.089