Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte4g01044 ATGAGTAATTGGTTGGAATTTCCATTGACTCCACACTTGAAGATGGACGAAGCGTTTGAGAGAGAAACCCAAGACCAACATCACCATCCTCACCTTCATGCTGACTTTCCTCCTCTCTTGTCTGCCATGCCTTTGCGTTCTCTCTCTGTGGCTGACTGCTTCAGGCGCTCAGATGGTTCTCCAGAATGGAGATTCGAGGACACCTTATCTGCAAGTAATACGAGCGAAGAAGCTCCAAAGCTTGAAGATTTCTTGGGTGGTTACTTGAACTCTCCTGCTACTGAAACTAAAGTCTTTTGCCAAAGCGCACATCAACACAGAGACAATGAGAATACTGTTCTCAAGATCAATGTTAACGTTCCGGCAGGTTTCAGTAGTGAAAGCACAGATGTAGAAACTGCAGAAGACATTGCCACGGAGACATCTTCTACGCTCCATTCATTCCGCAGTTGTAACGGTCAACCACAAGCGCCAATCCTTAGCAATGACATGTATGAGTCATTGTTGGGACAAACTCAGATTTTTGGTGGATGGTCAACTGGTGAAGCAAATGCATCATCACTGGTCCTGACCATGAGCCCCGATACTGTGCAAGATAATGGAGTGGATGGAATTTCGTCTTTGGTAGTAGCTGACACAAGTAAAAGGTTGGTTAGTAAGTCGATCAACAGAGAACGAGTTCCTCGCAAGTCTATAGATACATTTGGACAGAGAACATCTCAATATCGTGGGGTTACCAGGCATAGGTGGACTGGGAGGTATGAGGCTCATCTGTGGGATAGCAGTAGTAGAAAGGAAGGCCAGACAAGAAAAGGAAGGCAAGGTGGTTACATTTTGTCAGGTGGTTATGATATGGAAGAAAAAGCAGCAAGGACTTATGATTTAGCTGCACTCAAGACTTACGAGAAAGAACTTGAAGTGATGAAACTCATGAGCAGACAGGAATTTGTTGCCCATTTAAGAAGGAAAAGCAGTGGCTTTTCTAGAGGAGCATCTATGTATAGAGGAGTAACAAGACATCACCAGCATGGAAGGTGGCAAGCTAGGATTGGAAGAGTTGCAGGAAACAGAGACCTGTACCTTGGAACCTTTAGTACACAGGAAGAAGCTGCAGAAGCATATGATATAGCAGCAATTAAGTTTAGGGGAACAAGTGCTGTGACCAACTTTGATATAAGTAGGTATGATGTTGATAGAATATGCTCAAGCTCAACTCTTATAGCGGGTGACTTGGCTAAACGGTCACCAAAAGACTCACTTTGTAGCTTCATCGAGGATTACAATTCTTGCGTTTCATCTACGTCCTCTCAGTCCCTTTTGGCTTTGACAAAGGGTGAGAATAATGACATTGAAAGTGCGGTAGTATGGACTAGCAATTCTGCAGATGATGATCAACAGATTGAACATGGTAAAAATACAGATAGGGCTGGTCATGACCAGGCTGATCCAAGCAGCAGGAACTCATCAACCCAGCAAAGTTCAGAAGCATTGCCAAATGATCAATTTGGTGTTGGTGGAGCTGAGTATACTCATTCCTTTTTCTTTGAGGGGCCAAAGTACAATGATGGCAACAAGGAGAGTACTGATCCCATGAGCACAGAAAAGCTTGGCAATTTATCCTTGTTGGTTCCTCACGTTCCTACTTTTGCTTCATGGAAGGATTGA 1665 0.439 MSNWLEFPLTPHLKMDEAFERETQDQHHHPHLHADFPPLLSAMPLRSLSVADCFRRSDGSPEWRFEDTLSASNTSEEAPKLEDFLGGYLNSPATETKVFCQSAHQHRDNENTVLKINVNVPAGFSSESTDVETAEDIATETSSTLHSFRSCNGQPQAPILSNDMYESLLGQTQIFGGWSTGEANASSLVLTMSPDTVQDNGVDGISSLVVADTSKRLVSKSINRERVPRKSIDTFGQRTSQYRGVTRHRWTGRYEAHLWDSSSRKEGQTRKGRQGGYILSGGYDMEEKAARTYDLAALKTYEKELEVMKLMSRQEFVAHLRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNRDLYLGTFSTQEEAAEAYDIAAIKFRGTSAVTNFDISRYDVDRICSSSTLIAGDLAKRSPKDSLCSFIEDYNSCVSSTSSQSLLALTKGENNDIESAVVWTSNSADDDQQIEHGKNTDRAGHDQADPSSRNSSTQQSSEALPNDQFGVGGAEYTHSFFFEGPKYNDGNKESTDPMSTEKLGNLSLLVPHVPTFASWKD* 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte4g01044 554 SUPERFAMILY DNA-binding domain 332 393 IPR016177 GO:0003677
Pte4g01044 554 CDD AP2 332 393 IPR001471 GO:0003700|GO:0006355
Pte4g01044 554 ProSiteProfiles AP2/ERF domain profile. 333 391 IPR001471 GO:0003700|GO:0006355
Pte4g01044 554 MobiDBLite consensus disorder prediction 464 481 - -
Pte4g01044 554 Gene3D AP2/ERF domain 240 308 IPR036955 GO:0003700|GO:0006355
Pte4g01044 554 Gene3D AP2/ERF domain 333 393 IPR036955 GO:0003700|GO:0006355
Pte4g01044 554 ProSiteProfiles AP2/ERF domain profile. 241 311 IPR001471 GO:0003700|GO:0006355
Pte4g01044 554 SMART rav1_2 333 397 IPR001471 GO:0003700|GO:0006355
Pte4g01044 554 SMART rav1_2 241 317 IPR001471 GO:0003700|GO:0006355
Pte4g01044 554 PRINTS Ethylene responsive element binding protein signature 373 393 IPR001471 GO:0003700|GO:0006355
Pte4g01044 554 PRINTS Ethylene responsive element binding protein signature 242 253 IPR001471 GO:0003700|GO:0006355
Pte4g01044 554 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 73 479 - -
Pte4g01044 554 SUPERFAMILY DNA-binding domain 240 302 IPR016177 GO:0003677
Pte4g01044 554 MobiDBLite consensus disorder prediction 458 502 - -
Pte4g01044 554 Pfam AP2 domain 241 299 IPR001471 GO:0003700|GO:0006355
Pte4g01044 554 Pfam AP2 domain 334 383 IPR001471 GO:0003700|GO:0006355
Pte4g01044 554 FunFam AP2-like ethylene-responsive transcription factor 332 393 - -
Pte4g01044 554 MobiDBLite consensus disorder prediction 482 499 - -
Pte4g01044 554 CDD AP2 240 299 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte4g01044 Pte-Chr4 41564549 41567680 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte4g01044 1 419 AP2-EREBP Transcription Factor Family AT1G72570 47.357 5.81e-115 345
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Pte4g01044 AP2 2e-07 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte4g01044 K09285 - gmx:100809762 577.785