Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte4g01039 ATGTTTTTGAAAAAGCTGTTACTCAGTTCCATAACCCCCAGATGCTTGAAGTTTAAAGATTTGTCTTTGGAACCAAAACCAGAATGTCCCAAGAAAACTTCACGTAGGATATCTCTTTCTGACTTGAGTGGTTCATCAACACTGTCTATCATGAGTGATTTGTCGTCCAATTCTGTTCTGGGGTCAAATCTTCATATATTTACTCTTCAAGAACTTAGGGACATCACTCTGTGCTTCTCTAAAACCAATTTTCTAGGTAAGGGTGGGTTTGGAAAAGTGTACAAAGGATTCATTGATGACAACCTTAGGCCTGGATTGGAAGCTCAACTTGTTGCTATTAAGGTCCTAGACTTGGACGGCAAACAAGGACACAGAGAGTGGCTGGCTGAAGTAATATTTCTTGGGCAACTAAAGCACCCTCATCTTGTGAACTTGATTGGTTATTGCTGTGAAGATGAACACAGGCTGCTTGTCTATGAATACATGGACCGGGGTAACTTGGATAGCAAGCTCTTTAACAGTTATACAGCAACCTTGCCTTGGTTAACAAGATTGAAAATAGCCATTGGAGCTGCTAAAGGCCTTGCATTCCTTCATGAAGAAGAAAGACCAGTCATCTATAGAGATGTTAAAACTTCAAACATCCTATTGGACACAGATTACAATGCCAAGGTCTCTGATTTTGGGCTAGCAACGGATAGTCCTGAAGGAGAAGACTCCAATGTCAGCACAAGAGTTGTGGGCACTCATGGCTATGCAGCTCCCGAATACATCATGACAGGTCATCCGACGACTATGAGTGATGTATTCAGCTTTGGGATAGTCCTACTGGAAATGCTTACAGGAAGACGTTCAGTTGAGAAAAATCGGCCAACGAGAGAGAAGAATTTGGTACAGTGGGCAAGGCCAATGTTGAAGGACCCCCACAAACTTGATAGGATTATGGACCCAAGACTTGAAGGTCAGTACTCAAGAGAAGGGGCTAGAAAGGCAGCTCTACTAGCTCATCGATGTCTAAGTCGTCATCCAAAATCAAGACCTACTATGAAAAAAGTGGTGAAGACCCTAGAACCTCTCATGGACTTGAATGACATCCCAGTTGGTCATTTTGTCTACGTCGTCCCAATTGAAGGTGCAAAAGAAACTTCAGACGTGATAGTCAATATTAAGAAAAATGGCCCGAATGAATGTGATAATGCGCTAAGAAAAAACATTACAAGCGAAGAACACAGAGACAGAAGTGATAATAACAAAGACAAAGGGCGTCATCATAGGCATCGAAATAGTCAGCGGCGTAGACATCAGATTAAGCCATTGAACTCTCGTGGAGTCTACTCTGATACTACCTTGTATGAAACTCTTGGAACTAGACTGTACTCTACCAACCAAGCACCACACATCCATTAA 1407 0.4215 MFLKKLLLSSITPRCLKFKDLSLEPKPECPKKTSRRISLSDLSGSSTLSIMSDLSSNSVLGSNLHIFTLQELRDITLCFSKTNFLGKGGFGKVYKGFIDDNLRPGLEAQLVAIKVLDLDGKQGHREWLAEVIFLGQLKHPHLVNLIGYCCEDEHRLLVYEYMDRGNLDSKLFNSYTATLPWLTRLKIAIGAAKGLAFLHEEERPVIYRDVKTSNILLDTDYNAKVSDFGLATDSPEGEDSNVSTRVVGTHGYAAPEYIMTGHPTTMSDVFSFGIVLLEMLTGRRSVEKNRPTREKNLVQWARPMLKDPHKLDRIMDPRLEGQYSREGARKAALLAHRCLSRHPKSRPTMKKVVKTLEPLMDLNDIPVGHFVYVVPIEGAKETSDVIVNIKKNGPNECDNALRKNITSEEHRDRSDNNKDKGRHHRHRNSQRRRHQIKPLNSRGVYSDTTLYETLGTRLYSTNQAPHIH* 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte4g01039 468 FunFam Serine/threonine-protein kinase BIK1 45 161 - -
Pte4g01039 468 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 162 365 - -
Pte4g01039 468 CDD STKc_IRAK 85 359 - -
Pte4g01039 468 ProSitePatterns Serine/Threonine protein kinases active-site signature. 205 217 IPR008271 GO:0004672|GO:0006468
Pte4g01039 468 ProSiteProfiles Protein kinase domain profile. 79 360 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte4g01039 468 MobiDBLite consensus disorder prediction 393 444 - -
Pte4g01039 468 Gene3D Phosphorylase Kinase; domain 1 43 161 - -
Pte4g01039 468 ProSitePatterns Protein kinases ATP-binding region signature. 85 114 IPR017441 GO:0005524
Pte4g01039 468 Gene3D Transferase(Phosphotransferase) domain 1 162 366 - -
Pte4g01039 468 SMART serkin_6 79 360 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte4g01039 468 MobiDBLite consensus disorder prediction 420 438 - -
Pte4g01039 468 MobiDBLite consensus disorder prediction 402 419 - -
Pte4g01039 468 PANTHER OS01G0588500 PROTEIN-RELATED 50 359 - -
Pte4g01039 468 SUPERFAMILY Protein kinase-like (PK-like) 55 357 IPR011009 -
Pte4g01039 468 Pfam Protein kinase domain 80 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte4g01039 Pte-Chr4 41540152 41542227 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte4g01039 4 360 Receptor kinase-like Gene Family AT3G58690 44.022 4.53e-94 288
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Pte4g01039 Pkinase 5.8e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte4g01039 - - qsu:112001648 606.29