Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte4g01038 ATGACCATTGAGACTCCAACATGGGTGTCATATCCTGCAGTATGGCTGGCCACCGCAGCCCTCGTATTCCTCTTTGGTCGTCTTCTCCGCCGTCAAAAGCTCCATCTACCACCCGGTCCTAAACCTTGGCCTATTATTGGAAATCTAAACCTGATTGGACCACTTCCACACCGATCTCTCCATGAACTCTCGAAAAAATATGGACCAATTATGTATCTTAAGTTTGGTTCCTTTCCAGTGTTAGTAGGTTCTTCTGCAGAAATGGCGAAGTCGATACTCAAAACCCATGATATCATCTTTGCCGGCCGGCCAAAGACTGCTGCAGGCAAATACACAACCTACAACTACTCTGACATCACTTGGTCCCCTTATGGTTCATATTGGCGCCAAGCTCGGAGGATGTGTGCTTTGGAATTGTTCAGTGCCAAACGCCTCGATTCCTTTGAGTACATAAGAAGGGAAGAGCTGGCTGGTGTGCTTAGAGAGCTCCACATCTATGCTACCAGCAAAAAACCTATCCACTTGAAGGATCGGCTTACAGATTTAAGCCTTAATGTTATAAGCAGAATGGTGCTGGGGAAAAAATACACGCAAAAGTCTGAGAGTTCGATCATTGCACCAGAGGAGTTCAAGGAGATGTTGGATGAGTTGTTCTTGCTCAATGGGGTTATGGATATTGGAGATTCCATTCCTTGGCTTGGTTTCATGGACTTGCAAGGCTATATAAAGAGAATGAAGGCTCTGGCCAAGAAGTTTGACTGGTTCATGGAGCATGTGCTGGATGAACACATTAAGAGACGAAAAGGGGTGGCAAATTATGTTGCAAGAGATATGGTGGATTTGTTATTGCAGCTTTCCGAAGATCCAAACCTGGAAGTCAAGCTGGAGAGGCATGGAGTAAAGGCATTTTCTCAGGACCTTATAGCTGGAGGAACAGAAAGCTCAGCAGTGACAGTAGAATGGGCAATCTGCGAACTCTTACGGAAGCCACATATAATTAAGAAGGCCCAAGAGGAATTAGACAGGGTAATTGGAAAAGAGAAATGGGTTGAAGAGAAAGACATTGTTAACTTGCCATATGTAAGTGCTATCATCAAAGAAACAATGAGGTTGCACCCTGTGGCACCTATGCTAGTACCAAGGGAGTCTCGTGAAGACTGCAAGATTGATGGGTATGACATACCCAAAGGTACCAGAACCCTTGTCAATGTGTTTACCATTGGAAGGGATCCTGCAATATGGGACAACCCAGAAGAATTTTACCCTGAAAGGTTTATTGGTAAACTTACTGATGTGAAAGGGCATGACTATGAGTTACTGCCATTTGGAGCTGGAAGAAGAATGTGCCCAGGTTATAGTCTTGGGATTAAAGTGATCCAAGCTAGTTTGTCCAACCTCTTGCATGGGTTTAACTGGAAATTACCTGAGGACATGAAGAAGGAAGACTTGGATATGGAGGAAATCTTTGGACTTTCTACTCCAAAGAAGATTCCTCTCGTTGTTGTGGCTGAGCCTAGGCTTCCACTGCATGTTTACTCAGTATGA 1545 0.4447 MTIETPTWVSYPAVWLATAALVFLFGRLLRRQKLHLPPGPKPWPIIGNLNLIGPLPHRSLHELSKKYGPIMYLKFGSFPVLVGSSAEMAKSILKTHDIIFAGRPKTAAGKYTTYNYSDITWSPYGSYWRQARRMCALELFSAKRLDSFEYIRREELAGVLRELHIYATSKKPIHLKDRLTDLSLNVISRMVLGKKYTQKSESSIIAPEEFKEMLDELFLLNGVMDIGDSIPWLGFMDLQGYIKRMKALAKKFDWFMEHVLDEHIKRRKGVANYVARDMVDLLLQLSEDPNLEVKLERHGVKAFSQDLIAGGTESSAVTVEWAICELLRKPHIIKKAQEELDRVIGKEKWVEEKDIVNLPYVSAIIKETMRLHPVAPMLVPRESREDCKIDGYDIPKGTRTLVNVFTIGRDPAIWDNPEEFYPERFIGKLTDVKGHDYELLPFGAGRRMCPGYSLGIKVIQASLSNLLHGFNWKLPEDMKKEDLDMEEIFGLSTPKKIPLVVVAEPRLPLHVYSV* 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte4g01038 514 PRINTS E-class P450 group I signature 88 109 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte4g01038 514 PRINTS E-class P450 group I signature 182 200 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte4g01038 514 PRINTS E-class P450 group I signature 449 472 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte4g01038 514 PRINTS E-class P450 group I signature 299 316 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte4g01038 514 PRINTS E-class P450 group I signature 319 345 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte4g01038 514 PRINTS E-class P450 group I signature 403 427 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte4g01038 514 PRINTS E-class P450 group I signature 439 449 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte4g01038 514 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte4g01038 514 PRINTS E-class P450 group I signature 362 380 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte4g01038 514 PRINTS P450 superfamily signature 310 327 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte4g01038 514 PRINTS P450 superfamily signature 440 449 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte4g01038 514 PRINTS P450 superfamily signature 363 374 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte4g01038 514 FunFam Cytochrome P450 84A1 28 507 - -
Pte4g01038 514 Pfam Cytochrome P450 37 494 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte4g01038 514 PANTHER CYTOCHROME P450 98A9 13 513 - -
Pte4g01038 514 SUPERFAMILY Cytochrome P450 37 506 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte4g01038 514 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 442 451 IPR017972 GO:0005506|GO:0016705
Pte4g01038 514 Gene3D Cytochrome P450 26 503 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte4g01038 514 CDD CYP71_clan 68 499 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte4g01038 Pte-Chr4 41527990 41530048 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte4g01038 19 514 Cytochrome P450 AT5G07990 41.732 7.54e-138 406
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte4g01038 K20623 - zju:107410145 828.55