Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte4g01032 ATGATGCGGTGTTATTATTGGAATACGTACTTTGCTATTGCAGTCACCATTGTTGTTGTGAAACTTTTGGTGCAATCGATTTTCAATAACACTGGTGGAGAAGTTGTGATCAATTACAAAGATGGAAAACATGAATTATTGGGTACTCCCACTGAGACTGCATTGTTGGAGTTTGCCTTGTCAGTTGGAGGAAATTTTCAAGCAGAGAGAAAAGCATGTGAGCTAGTTAAACTTGAGCCATTTAACTCAACAAAGAAACGAATGGGTGTAGTCCTGCAACTTCCACAACAACTTCCACAAGGCGGTGTACAACAAGCTCATTGCAAAGGTGCTTCTGAAATAATCTTGAATAGGAGTAGGACAGATTGTAAGGAGAGTCGGAGGAGGGGGAGAGGTAAAGGGGAGAGACAAAAGGGTCTGGGATTTTTTAAGGGGTAA 438 0.4132 MMRCYYWNTYFAIAVTIVVVKLLVQSIFNNTGGEVVINYKDGKHELLGTPTETALLEFALSVGGNFQAERKACELVKLEPFNSTKKRMGVVLQLPQQLPQGGVQQAHCKGASEIILNRSRTDCKESRRRGRGKGERQKGLGFFKG* 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte4g01032 145 PANTHER CATION TRANSPORTING ATPASE 18 121 - -
Pte4g01032 145 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 19 123 IPR023299 GO:0000166
Pte4g01032 145 Gene3D - 17 136 IPR023299 GO:0000166
Pte4g01032 145 MobiDBLite consensus disorder prediction 121 145 - -
Pte4g01032 145 Pfam Cation transport ATPase (P-type) 38 120 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte4g01032 Pte-Chr4 41484280 41484717 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte4g01032 20 116 Primary Pumps ATPases AT4G37640 70.103 1.23e-37 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte4g01032 K01537 - twl:120000264 135.191