Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte4g01028 ATGGCCGTCGTCACTGCTAGGCTTTACCACCTCCAACTGACCTTCTTCCTATTCATCTTCAATTCTCCAATTTTGACTTATTCAATAACAGAGGGAGAAGCTTTGCTTAAGCTCAAGAGTTCATTTACAAACGCTGCTGCTCTTCAATCTTGGGTGCCCATGTCAGAACCTTGCAGCGCAAGAAATCGATGGCAAGGAGTTCTTTGTTCCAACGGCTTTGTCACAGGTCTTCGTCTTGAAGGATTGAGTCTATCAGGAAAGTTGGACGTGGATGCATTGCTTCAGATCAAGGGTCTACGTACCATTAGCATTGCAAAAAATTTATTTTCAGGTCCAATGCCTGACTTGAATCGGATGGGTTCTTTGAAGGCGATGTACTTGTCAGGGAATCAGTTTTCAGGAGAGATTCCTTCAGATTATTTTGCTAAAATGGGTTCCTTGAAGAAGATATGGATTTCGGAGAACAAATTTACAGGCAATATTCCTTCTTCTCTAGCTCAAGTCCCTAAGCTTTTGGAACTGTATCTCCAAAACAATCAGTTTGGCGGAAGTATTCCAAATATAGAAACACAATCATTGTTGGCTTTTAATGTCTCCAACAACAAATTGGAAGGTGAAATTCCAAAAACTTTAATGAGACTTGATATGAGTTCATTTTCTGGGAATCCTGGCCTATGTGGTGGGAAAGTAGGAAAAGAATGTGCAGTGCCAAAGTCGGATACGATGCCTGTTAGCAATAACGACAAGTCTCCTTCCCCTTCAAATAGTACACGTAGCAAGAAAGCAATTGCTGGTGGTATAACAGCAAGTGCAGTATTCATCTCTGTTATCATTTTCATTCTAGTTAGAACAAGGCGAAAGCAAGAAGAGTTTGATACTCTTGCTGTAGATAGTAGAAATAGTACGAACCTTGAGGAGTCAGTTCAGGTTCAAGTGTCTGAACCACTCAAAAGAGAGATTGATTCTGCGGTTAAAAGAGGAAACAGTTCAAGCAGGAGGACAGGGTCGTCCAATCATGGCAAAGGTGGAAGTAATGCAGCAGAACTAGTGATCGTTAATGACGAAAAGGGTGTGTTCGGGCTTTCAGATTTGATGAAGGCAGCGGCAGAAGTGCTTGGAAATGGAGGACTGGGTTCTTCTTATAAAGCTGTGATGGTTAATGGTGTAGCAGTGGTTGTGAAGAGGATGAGAGATATGAATGCTTTAGGCAAAGAAGATTTTGAAGAAGAAATGAAGCAGATTGGAAAGCTAAGACACTGGAATATCTTGACTCCATTAGCCTTTCATTTCAGAAAAGATGAGAAGCTGCTTGTCTCTGAGTATGTTCCTAAAGGCAGCCTTCTCTACTTGTTACATGGTGATCGAGGGCCATCAAATGCAGAACTTGATTGGCCTGCACGTCTGAAGATTGTTCATGGGATTGCCAAAGGGTTAGAATATCTTCATACGGAGTTGGTATCCAGCGAAGTACCTCACGGAAATCTCAAGTCCAGCAACATCCTGCTAGGTCCAAACTTTGAGCCGCTGCTTTCAGATTTTGGATATAGCTCATTCATCAATTCCCCAAACAGAACACAAGCTCTATTTGCATATAAAGCTCCTGAAGCTTTAGAAAATGCTCAAGTTACTCCAAAGTGTGACGTATACTGTCTTGGAATTGTCATTCTTGAGATACTCACTGGAAAATTTCCATCTCAATATCTTAGTAATGGCAAAGGTGGCATTGATGCTGTGGAATGGGTTATGTCAGCAATTTCTGAGGGAAGAGAAGTTGATGTGTTCGATCCTCAAATCACAAACTCTAAGAACTCACTTGGAGAGATGAAGCAGCTTCTCCATGTTGGTGCTGCCTGCACTCAAAATAATCCAGAGGAGCGGTTAGATTTACGGGAAGCCACTAGAAGGATAGAAGAAATAGTGAAAGAGAGTACTCAAACATCAACAAGAGGAATACAAGTTGCACCTACACTAGGCAATGGCCTTGCAGGGCATACAACCCAGAATCATATGACAGGAGAGCGTGGTGACCAATACATGCGGAGACATGAATCAGATAGCTACTAG 2064 0.4201 MAVVTARLYHLQLTFFLFIFNSPILTYSITEGEALLKLKSSFTNAAALQSWVPMSEPCSARNRWQGVLCSNGFVTGLRLEGLSLSGKLDVDALLQIKGLRTISIAKNLFSGPMPDLNRMGSLKAMYLSGNQFSGEIPSDYFAKMGSLKKIWISENKFTGNIPSSLAQVPKLLELYLQNNQFGGSIPNIETQSLLAFNVSNNKLEGEIPKTLMRLDMSSFSGNPGLCGGKVGKECAVPKSDTMPVSNNDKSPSPSNSTRSKKAIAGGITASAVFISVIIFILVRTRRKQEEFDTLAVDSRNSTNLEESVQVQVSEPLKREIDSAVKRGNSSSRRTGSSNHGKGGSNAAELVIVNDEKGVFGLSDLMKAAAEVLGNGGLGSSYKAVMVNGVAVVVKRMRDMNALGKEDFEEEMKQIGKLRHWNILTPLAFHFRKDEKLLVSEYVPKGSLLYLLHGDRGPSNAELDWPARLKIVHGIAKGLEYLHTELVSSEVPHGNLKSSNILLGPNFEPLLSDFGYSSFINSPNRTQALFAYKAPEALENAQVTPKCDVYCLGIVILEILTGKFPSQYLSNGKGGIDAVEWVMSAISEGREVDVFDPQITNSKNSLGEMKQLLHVGAACTQNNPEERLDLREATRRIEEIVKESTQTSTRGIQVAPTLGNGLAGHTTQNHMTGERGDQYMRRHESDSY* 688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte4g01028 687 SUPERFAMILY L domain-like 31 227 - -
Pte4g01028 687 MobiDBLite consensus disorder prediction 658 673 - -
Pte4g01028 687 MobiDBLite consensus disorder prediction 327 343 - -
Pte4g01028 687 MobiDBLite consensus disorder prediction 240 260 - -
Pte4g01028 687 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 12 643 IPR046959 -
Pte4g01028 687 Pfam Leucine rich repeat 121 181 IPR001611 GO:0005515
Pte4g01028 687 MobiDBLite consensus disorder prediction 302 346 - -
Pte4g01028 687 Pfam Protein kinase domain 370 633 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte4g01028 687 Gene3D Transferase(Phosphotransferase) domain 1 442 655 - -
Pte4g01028 687 Gene3D Phosphorylase Kinase; domain 1 330 441 - -
Pte4g01028 687 SUPERFAMILY Protein kinase-like (PK-like) 370 635 IPR011009 -
Pte4g01028 687 MobiDBLite consensus disorder prediction 237 260 - -
Pte4g01028 687 ProSiteProfiles Protein kinase domain profile. 366 640 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte4g01028 687 Pfam Leucine rich repeat N-terminal domain 30 70 IPR013210 -
Pte4g01028 687 Gene3D Ribonuclease Inhibitor 30 142 IPR032675 -
Pte4g01028 687 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 90 185 - -
Pte4g01028 687 Gene3D Ribonuclease Inhibitor 143 236 IPR032675 -
Pte4g01028 687 MobiDBLite consensus disorder prediction 658 687 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte4g01028 Pte-Chr4 41455807 41458344 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte4g01028 4 639 Receptor kinase-like Gene Family AT3G42880 45.329 0.0 565
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Pte4g01028 Pkinase 2.2e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte4g01028 - - qsa:O6P43_027522 805.053