Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte4g01023 ATGGATGAAGACGATGAGATCCAATCGCTGGAGAGTGGTTCACCTCAGTCTCCGACGAGATCTAACGGTAGGATTACGGTGACGGTGGCGGCAGCACCAGCGTCGGCTCAGAACACGTTGGCGTTGGCGTTGCCGATTCAGCAGCAGCCGAGGAGTAACGGTGGTGGAAGGGAGGACTGTTGGAGTGAAGGAGCTACATCCGTGTTGATCGATGCTTGGGGCGAGAGGTACTTGGAGTTGAGTAGAGGGAATCTGAAGCAGAAGCACTGGAAGGAAGTTGCCGACGTTGTGAGTAGCAGAGAGGACTATAGGAAGACACCGAAGACAGATATCCAGTGCAAGAATCGGATTGATACAGTGAAGAAGAAGTTCAAGTTGGAGAAAGCGAAGATGGCAGCTGGTGCTGGTCCTAGCAAATGGCCTTTCTTTGATAGATTGGATCATTTGATTGGCACATCTGCAAAGATTGTTGGTTCTGTTGGAAATGCCAATCTTTTGCGGACACAGAAAGTTCCTCTGGGAATTCCAGTTGGGGTTAAGTCAGTGAATCAGTCTCAGCAGAAACAGCAACATCAACCATTCAAGAATCAGAAGATACAGATCCGTAGGAGGGCTCCAGTTGATTCAGATTCATCTGACGGCGTACCATCTCCGGTATCTACAGATAGTTTTCCGCCGGATACTTACGAAATTAAGAGGCCAAGAGTAATGCAAAGGGGTGAGATGAATTCAAATCCTGCTGCTGCTGGTGGTGGTGATAGGGGAGGTGTGGATAAGGAAGGAGGGAAAAATAAAGGGTGGGGTGGTGCAGTGAAGGAATTGACACAAGCAATATTGAAGTTTGGGGAAGCTTATGAACAAGCTGAAAGCTCAAAGTTGCAGCAAGTGGTAGAGATGGAGAAGCAGAGGATGAAGTTTGCCAAGGAACTCGAATTGCAGAGAATGCAGTTTTTCATGAAGACCCAGTTGGAGATCTCTCAGTTGAAACATTGCAGGAGAGTTGGAAATACTAGCAGCCATCATCACAACATTAACAATAACAGTGACAGTACTGATTAG 1059 0.474 MDEDDEIQSLESGSPQSPTRSNGRITVTVAAAPASAQNTLALALPIQQQPRSNGGGREDCWSEGATSVLIDAWGERYLELSRGNLKQKHWKEVADVVSSREDYRKTPKTDIQCKNRIDTVKKKFKLEKAKMAAGAGPSKWPFFDRLDHLIGTSAKIVGSVGNANLLRTQKVPLGIPVGVKSVNQSQQKQQHQPFKNQKIQIRRRAPVDSDSSDGVPSPVSTDSFPPDTYEIKRPRVMQRGEMNSNPAAAGGGDRGGVDKEGGKNKGWGGAVKELTQAILKFGEAYEQAESSKLQQVVEMEKQRMKFAKELELQRMQFFMKTQLEISQLKHCRRVGNTSSHHHNINNNSDSTD* 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte4g01023 352 MobiDBLite consensus disorder prediction 182 196 - -
Pte4g01023 352 FunFam trihelix transcription factor ASIL2 61 126 - -
Pte4g01023 352 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 30 332 IPR044823 -
Pte4g01023 352 MobiDBLite consensus disorder prediction 182 268 - -
Pte4g01023 352 Gene3D - 61 126 - -
Pte4g01023 352 MobiDBLite consensus disorder prediction 1 25 - -
Pte4g01023 352 MobiDBLite consensus disorder prediction 10 25 - -
Pte4g01023 352 Pfam Myb/SANT-like DNA-binding domain 58 149 IPR044822 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte4g01023 Pte-Chr4 41401310 41402593 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte4g01023 23 343 Trihelix Transcription Factor Family AT3G14180 49.015 3.66e-100 301
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Pte4g01023 Myb_DNA-bind_4 4.2e-25 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte4g01023 - - qsa:O6P43_027506 435.647